RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 SLC24A2Q9UI40 661 aa12.46□□□□□ -0.41
CDH11-204ENST00000562712 TRMT6Q9UJA5 497 aaKnown RBP12.46□□□□□ -0.41
CDH11-204ENST00000562712 COLEC10Q9Y6Z7 277 aa12.46□□□□□ -0.41
CDH11-204ENST00000562712 U3KQA8 63 aa12.46□□□□□ -0.41
CDH11-204ENST00000562712 HMX2A2RU54 273 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 OR52A4PA6NMU1 304 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 TCEA3O75764 348 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 KRT38O76015 456 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 KCNK5O95279 499 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 MATN4O95460 622 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 NUDT17P0C025 328 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 MTHFD1P11586 935 aaKnown RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 CEACAM1P13688 526 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 ENO3P13929 434 aaPredicted RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 STMN1P16949 149 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 NDUFS1P28331 727 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 GCAP28676 217 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 SLC19A1P41440 591 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 MAPK9P45984 424 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 SLC12A2P55011 1212 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 TAS2R39P59534 338 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 IL2P60568 153 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 UBE2IP63279 158 aaKnown RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 PDAP1Q13442 181 aaKnown RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 USP10Q14694 798 aaKnown RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 TRIP6Q15654 476 aaKnown RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 ACSBG2Q5FVE4 666 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 MROH9Q5TGP6 573 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 LRRC8EQ6NSJ5 796 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 PAQR3Q6TCH7 311 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 TAOK1Q7L7X3 1001 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 GIMAP7Q8NHV1 300 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 DCAKDQ8WVC6 231 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 NAT6Q93015 286 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 SH3KBP1Q96B97 665 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 CXorf40BQ96DE9 158 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 PDLIM5Q96HC4 596 aaKnown RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 RMDN2Q96LZ7 410 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 C12orf66Q96MD2 445 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 STN1Q9H668 368 aaKnown RBP12.45□□□□□ -0.42
CDH11-204ENST00000562712 UCK1Q9HA47 277 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 SYTL2Q9HCH5 934 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 POT1Q9NUX5 634 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 LRIT1Q9P2V4 623 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 SLC39A10Q9ULF5 831 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 USP24Q9UPU5 2620 aa12.45□□□□□ -0.42
CDH11-204ENST00000562712 ARID1BQ8NFD5 2236 aaPredicted RBP12.44□□□□□ -0.42
CDH11-204ENST00000562712 RHPN2P1A8MT19 583 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 PPM1DO15297 605 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 ZW10O43264 779 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 VIPP01282 170 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 SHBGP04278 402 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 GP1BAP07359 652 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 MPC1LP0DKB6 136 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 MYF5P13349 255 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 SAT1P21673 171 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 KCNA4P22459 653 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 CRABP2P29373 138 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 GPR3P46089 330 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 RGS4P49798 205 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 MAZP56270 477 aaKnown RBP12.44□□□□□ -0.42
CDH11-204ENST00000562712 RAB10P61026 200 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 DAB2P98082 770 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 HHEXQ03014 270 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 ABRQ12979 859 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 ILKQ13418 452 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 NR1D2Q14995 579 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 RASA2Q15283 850 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 ZKSCAN8Q15776 578 aaPredicted RBP12.44□□□□□ -0.42
CDH11-204ENST00000562712 UNC5DQ6UXZ4 953 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 CYHR1Q6ZMK1 362 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 ZNF438Q7Z4V0 828 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 CCDC91Q7Z6B0 441 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 PIM3Q86V86 326 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 TDRPQ86YL5 185 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 CEP97Q8IW35 865 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 TRIM48Q8IWZ4 208 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 EEF1AKMT1Q8WVE0 214 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 MTBPQ96DY7 904 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 FOPNLQ96NB1 174 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 FERD3LQ96RJ6 166 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.44□□□□□ -0.42
CDH11-204ENST00000562712 MVB12BQ9H7P6 319 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 IMP3Q9NV31 184 aaKnown RBP12.44□□□□□ -0.42
CDH11-204ENST00000562712 CFAP20Q9Y6A4 193 aaKnown RBP12.44□□□□□ -0.42
CDH11-204ENST00000562712 RNF215Q9Y6U7 377 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 CACNA1BQ00975 2339 aa12.44□□□□□ -0.42
CDH11-204ENST00000562712 ARHGEF17Q96PE2 2063 aaPredicted RBP12.44□□□□□ -0.42
CDH11-204ENST00000562712 SPEGQ15772 3267 aa12.43□□□□□ -0.42
CDH11-204ENST00000562712 KMT2BQ9UMN6 2715 aaPredicted RBP12.43□□□□□ -0.42
CDH11-204ENST00000562712 CPED1A4D0V7 1026 aa12.43□□□□□ -0.42
CDH11-204ENST00000562712 GIPC1O14908 333 aa12.43□□□□□ -0.42
CDH11-204ENST00000562712 KRT37O76014 449 aa12.43□□□□□ -0.42
CDH11-204ENST00000562712 WISP3O95389 354 aaPredicted RBP12.43□□□□□ -0.42
CDH11-204ENST00000562712 RPN2P04844 631 aa12.43□□□□□ -0.42
CDH11-204ENST00000562712 SNRPAP09012 282 aaKnown RBP12.43□□□□□ -0.42
CDH11-204ENST00000562712 CDK4P11802 303 aa12.43□□□□□ -0.42
CDH11-204ENST00000562712 SLC26A3P40879 764 aa12.43□□□□□ -0.42
CDH11-204ENST00000562712 NOVA1P51513 510 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms