RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 DNAJB13P59910 316 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 UBXN2BQ14CS0 331 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 C2orf27AQ580R0 203 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 MED27Q6P2C8 311 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 KDELC1Q6UW63 502 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CLEC4FQ8N1N0 589 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 RHEBL1Q8TAI7 183 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 DTX3LQ8TDB6 740 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 FAM83CQ9BQN1 747 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SLC46A2Q9BY10 475 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 LRTM1Q9HBL6 345 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 IRAK3Q9Y616 596 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 MYO9BQ13459 2157 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 PLXNB2O15031 1838 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 FAM92AA1XBS5 289 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 FFAR2O15552 330 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 VEGFDO43915 354 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 MPC1LP0DKB6 136 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 PIK3R1P27986 724 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SEC13P55735 322 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TRAF2Q12933 501 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 RAB6CQ53S08 254 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 GPRC6AQ5T6X5 926 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 ZNF549Q6P9A3 640 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CEP68Q76N32 757 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SLC7A5P1Q8MH63 180 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 NATD1Q8N6N6 113 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SIDT2Q8NBJ9 832 aaKnown RBP7.43□□□□□ -1.22
TCF4-216ENST00000562680 TWIST2Q8WVJ9 160 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SCRN2Q96FV2 425 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 TUBA1CQ9BQE3 449 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 RAB6CQ9H0N0 254 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 MIR1-1HGQ9H1L0 117 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 CXCL16Q9H2A7 254 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SLC2A4RGQ9NR83 387 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 FAM53CQ9NYF3 392 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 IL37Q9NZH6 218 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 ARMCX1Q9P291 453 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 DHRS7Q9Y394 339 aa7.43□□□□□ -1.22
TCF4-216ENST00000562680 SMCHD1A6NHR9 2005 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 LYPLA1O75608 230 aaPredicted RBP7.42□□□□□ -1.22
TCF4-216ENST00000562680 SLC22A3O75751 556 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 SRCP12931 536 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 TCN1P20061 433 aaPredicted RBP7.42□□□□□ -1.22
TCF4-216ENST00000562680 DRD1P21728 446 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 C5AR1P21730 350 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 NUDT1P36639 197 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 NME5P56597 212 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 NFATC2Q13469 925 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 ATP13A5Q4VNC0 1218 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 TMCO2Q7Z6W1 182 aaPredicted RBP7.42□□□□□ -1.22
TCF4-216ENST00000562680 SPATA6LQ8N4H0 392 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 MRPL38Q96DV4 380 aaKnown RBP7.42□□□□□ -1.22
TCF4-216ENST00000562680 ITCHQ96J02 903 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 OR2AG1Q9H205 316 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 SPAG4Q9NPE6 437 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 SLC2A6Q9UGQ3 507 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 H3BNC9 293 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 TRIM38O00635 465 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 IDH3BO43837 385 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 NIPSNAP2O75323 286 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 LEFTY1O75610 366 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 CBX6O95503 412 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 NTSR1P30989 418 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 RAD23AP54725 363 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 KLF10Q13118 480 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 RIPOR1Q6ZS17 1223 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 GALNT7Q86SF2 657 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 TMEM25Q86YD3 366 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 OR9Q1Q8NGQ5 310 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 ADPRHL2Q9NX46 363 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 CD84Q9UIB8 345 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 SH3D21A4FU49 640 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 HNRNPCL2B2RXH8 293 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 UBXN8O00124 270 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 FFAR3O14843 346 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 GPR42O15529 346 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 SULT1B1O43704 296 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 FASP25445 335 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 EPHA3P29320 983 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 ALDH9A1P49189 494 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 PSME3P61289 254 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 RPS21P63220 83 aaKnown RBP7.42□□□□□ -1.22
TCF4-216ENST00000562680 HERC3Q15034 1050 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 RGS21Q2M5E4 152 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 LACTB2Q53H82 288 aaPredicted RBP7.42□□□□□ -1.22
TCF4-216ENST00000562680 PRR23CQ6ZRP0 262 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 NET1Q7Z628 596 aaPredicted RBP7.42□□□□□ -1.22
TCF4-216ENST00000562680 CLNKQ7Z7G1 428 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 KRT73Q86Y46 540 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 GPR150Q8NGU9 434 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 CEP19Q96LK0 163 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 SGK2Q9HBY8 427 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 ACSL5Q9ULC5 683 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 DTNAQ9Y4J8 743 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 LOC285556D6RIA3 1793 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 UGT1A9O60656 530 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 GNSP15586 552 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 CD53P19397 219 aa7.42□□□□□ -1.22
TCF4-216ENST00000562680 MAGEA10P43363 369 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms