RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 SNX20Q7Z614 316 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 THAP5Q7Z6K1 395 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 MILR1Q7Z6M3 343 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 HIPK1Q86Z02 1210 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 CLVS1Q8IUQ0 354 aaPredicted RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 RIMKLAQ8IXN7 391 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 C8orf59Q8N0T1 100 aaPredicted RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 EID3Q8N140 333 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 TTC30BQ8N4P2 665 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 MDGA1Q8NFP4 955 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 GRIN3AQ8TCU5 1115 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 PROKR1Q8TCW9 393 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 RAB2BQ8WUD1 216 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 EEF1AKMT1Q8WVE0 214 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 EDARADDQ8WWZ3 215 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 HDAC2Q92769 488 aaKnown RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 ISG20Q96AZ6 181 aaKnown RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 TBC1D20Q96BZ9 403 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 ISOC1Q96CN7 298 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 VPS50Q96JG6 964 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 NSUN5Q96P11 429 aaKnown RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 RBM4BQ9BQ04 359 aaKnown RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 SLC39A3Q9BRY0 314 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 FEM1AQ9BSK4 669 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 NTMT1Q9BV86 223 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 RBM4Q9BWF3 364 aaKnown RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 NPLQ9BXD5 320 aaPredicted RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 GPR63Q9BZJ6 419 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 ZCCHC2Q9C0B9 1178 aaKnown RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 ING2Q9H160 280 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 MUC3BQ9H195 1237 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 P2RY12Q9H244 342 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 LATS2Q9NRM7 1088 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 GALPQ9UBC7 116 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 STOML2Q9UJZ1 356 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 BTRCQ9Y297 605 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 ZNF510Q9Y2H8 683 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 MED16Q9Y2X0 877 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 PRG3Q9Y2Y8 225 aaPredicted RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 TMED5Q9Y3A6 229 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 SPO11Q9Y5K1 396 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 ST14Q9Y5Y6 855 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 ZFP37Q9Y6Q3 630 aaPredicted RBP7.36□□□□□ -1.23
CFDP1-202ENST00000562602 HSPE1-MOB4S4R3N1 261 aa7.36□□□□□ -1.23
CFDP1-202ENST00000562602 NLRC5Q86WI3 1866 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 SERTM1A2A2V5 107 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 ZNF840PA6NDX5 716 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 PABPN1LA6NDY0 278 aaKnown RBP7.35□□□□□ -1.23
CFDP1-202ENST00000562602 DLGAP1O14490 977 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 EI24O14681 340 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 LSM1O15116 133 aaKnown RBP7.35□□□□□ -1.23
CFDP1-202ENST00000562602 FFAR2O15552 330 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 SOCS5O75159 536 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 ULK1O75385 1050 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 OR4F21O95013 312 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 PARNO95453 639 aaKnown RBP7.35□□□□□ -1.23
CFDP1-202ENST00000562602 CPNE6O95741 557 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 PRLP01236 227 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 KRT6AP02538 564 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 KRT6BP04259 564 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 CAPN1P07384 714 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 THRBP10828 461 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 MBL2P11226 248 aaPredicted RBP7.35□□□□□ -1.23
CFDP1-202ENST00000562602 SELPP16109 830 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 COL8A1P27658 744 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 ZFP36L2P47974 494 aaKnown RBP7.35□□□□□ -1.23
CFDP1-202ENST00000562602 TM4SF4P48230 202 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 RXRGP48443 463 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 KRT6CP48668 564 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 FLT3LGP49771 235 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 CLCN7P51798 805 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 ARHGDIAP52565 204 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 ACLYP53396 1101 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 RAD23AP54725 363 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 ARSFP54793 590 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 ERVPABLB-1P60509 514 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 VEPH1Q14D04 833 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 TAF12Q16514 161 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 MAPKAPK3Q16644 382 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 AP5B1Q2VPB7 878 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 FUT11Q495W5 492 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 TIGD2Q4W5G0 525 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 PITRM1Q5JRX3 1037 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 PAGE3Q5JUK9 113 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 CTSL3PQ5NE16 218 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 TPGS2Q68CL5 300 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 GRAMD4Q6IC98 578 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 SLC8B1Q6J4K2 584 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 IL27RAQ6UWB1 636 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 DLEU7Q6UYE1 221 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 MACC1Q6ZN28 852 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 Q6ZSR9 355 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 GOLGA7Q7Z5G4 137 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 NECAB2Q7Z6G3 386 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 RTN4RL1Q86UN2 441 aaPredicted RBP7.35□□□□□ -1.23
CFDP1-202ENST00000562602 IFNEQ86WN2 208 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 EPHX4Q8IUS5 362 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 KIAA2013Q8IYS2 634 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 CLEC4FQ8N1N0 589 aa7.35□□□□□ -1.23
CFDP1-202ENST00000562602 PGBD3Q8N328 593 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms