RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 S100BP04271 92 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 ALOX5P09917 674 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 FMO3P31513 532 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 GGT5P36269 586 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 MAP2K4P45985 399 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 PIK3CGP48736 1102 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 IFITM3Q01628 133 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 CDK5R2Q13319 367 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 TUSC3Q13454 348 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 GTF2H2Q13888 395 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 TAF1AQ15573 450 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 MAPK11Q15759 364 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 CTSL3PQ5NE16 218 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 GTF2H2CQ6P1K8 395 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 DET1Q7L5Y6 550 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 TAS2R42Q7RTR8 314 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 MILR1Q7Z6M3 343 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 PHACTR4Q8IZ21 702 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 EFHBQ8N7U6 833 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 OR10Q1Q8NGQ4 319 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 GTF2H4Q92759 462 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 B3GALT6Q96L58 329 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 TRIB3Q96RU7 358 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 DPY30Q9C005 99 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 FBXO44Q9H4M3 255 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 ZFP14Q9HCL3 533 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 MARCH2Q9P0N8 246 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 ERVK-18Q9QC07 812 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 ITGB1BP2Q9UKP3 347 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 FAM32AQ9Y421 112 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 NEUROG3Q9Y4Z2 214 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 DOCK4Q8N1I0 1966 aa13.73□□□□□ -0.21
VPS9D1-202ENST00000561976 ANKRD36A6QL64 1941 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 A0A0D9SEW6 157 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 FFAR3O14843 346 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 GPR42O15529 346 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 GABARAPO95166 117 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 PFKLP17858 780 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 PSMB9P28065 219 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 TTPAP49638 278 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 RAPSNQ13702 412 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 PON2Q15165 354 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 ADPRMQ3LIE5 342 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 TMEM236Q5W0B7 351 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 FKBP9P1Q75LS8 142 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 DCP2Q8IU60 420 aaKnown RBP13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 PIK3C3Q8NEB9 887 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 LPCAT1Q8NF37 534 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 MYEOVQ96EZ4 313 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 VMP1Q96GC9 406 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 SUSD3Q96L08 255 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 PPP3R2Q96LZ3 170 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 ZBED2Q9BTP6 218 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 CINPQ9BW66 212 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 IPPKQ9H8X2 491 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 NUDT4Q9NZJ9 180 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 MYO16Q9Y6X6 1858 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 MGEA5O60502 916 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 MITFO75030 526 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 GUCA1CO95843 209 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 CCDC159P0C7I6 412 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 CYP4B1P13584 511 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 SGO1Q5FBB7 561 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 SPANXN4Q5MJ08 99 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 MICU2Q8IYU8 434 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 MINDY2Q8NBR6 621 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 SH3GL1Q99961 368 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 RIBC2Q9H4K1 309 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 FLRT1Q9NZU1 646 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 AASSQ9UDR5 926 aa13.72□□□□□ -0.21
VPS9D1-202ENST00000561976 DRGXA6NNA5 263 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 OR7A17O14581 309 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 CREG1O75629 220 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 OTCP00480 354 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 SERPINA1P01009 418 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF865P0CJ78 1059 aaPredicted RBP13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 BMP4P12644 408 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 LPOP22079 712 aaPredicted RBP13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 RGRP47804 291 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 TRIP4Q15650 581 aaPredicted RBP13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 NPTX1Q15818 432 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 GTDC1Q4AE62 458 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 ARMCX6Q7L4S7 300 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 P2RY8Q86VZ1 359 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 OR7D4Q8NG98 312 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 RHBDF1Q96CC6 855 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF641Q96N77 438 aaPredicted RBP13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 INTS6Q9UL03 887 aaKnown RBP13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 NAALAD2Q9Y3Q0 740 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 TNPO3Q9Y5L0 923 aaKnown RBP13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 PRMT5O14744 637 aaPredicted RBP13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 CD52P31358 61 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 RYKP34925 604 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 KIAA0040Q15053 153 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 RFX4Q33E94 735 aa13.71□□□□□ -0.21
VPS9D1-202ENST00000561976 LDLRAD1Q5T700 205 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms