RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 BHLHE23Q8NDY6 225 aa2□□□□□ -2.09
RTF1-207ENST00000561076 MDGA1Q8NFP4 955 aa2□□□□□ -2.09
RTF1-207ENST00000561076 OR52N2Q8NGI0 321 aa2□□□□□ -2.09
RTF1-207ENST00000561076 OR56B1Q8NGI3 324 aa2□□□□□ -2.09
RTF1-207ENST00000561076 OR1J2Q8NGS2 313 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RP9Q8TA86 221 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 WDR20Q8TBZ3 569 aa2□□□□□ -2.09
RTF1-207ENST00000561076 HM13Q8TCT9 377 aa2□□□□□ -2.09
RTF1-207ENST00000561076 LRRC8CQ8TDW0 803 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TRPC4APQ8TEL6 797 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GANCQ8TET4 914 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GIPC3Q8TF64 312 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CHURC1Q8WUH1 139 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RLN3Q8WXF3 142 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DNAAF4Q8WXU2 420 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SYN2Q92777 582 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 CELF1Q92879 486 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 PINX1Q96BK5 328 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 DHX58Q96C10 678 aa2□□□□□ -2.09
RTF1-207ENST00000561076 LRRC39Q96DD0 335 aa2□□□□□ -2.09
RTF1-207ENST00000561076 MTERF3Q96E29 417 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PTCD3Q96EY7 689 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 PGM2Q96G03 612 aa2□□□□□ -2.09
RTF1-207ENST00000561076 WDYHV1Q96HA8 205 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ZNF419Q96HQ0 510 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 ATP6V1G3Q96LB4 118 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TSNARE1Q96NA8 513 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RBM14Q96PK6 669 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 LRRC37BQ96QE4 947 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PANX3Q96QZ0 392 aa2□□□□□ -2.09
RTF1-207ENST00000561076 OR14A2Q96R54 314 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SNX18Q96RF0 628 aa2□□□□□ -2.09
RTF1-207ENST00000561076 LMF1Q96S06 567 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ZNF607Q96SK3 696 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CDK5RAP1Q96SZ6 601 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 GPA33Q99795 319 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PRRX2Q99811 253 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ASCL2Q99929 193 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DDX50Q9BQ39 737 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 JPH2Q9BR39 696 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 ZSCAN5AQ9BUG6 496 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SCNM1Q9BWG6 230 aa2□□□□□ -2.09
RTF1-207ENST00000561076 C1QTNF5Q9BXJ0 243 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ZNF341Q9BYN7 854 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GLIS2Q9BZE0 524 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 THAP2Q9H0W7 228 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TMEM245Q9H330 911 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PLEKHA4Q9H4M7 779 aa2□□□□□ -2.09
RTF1-207ENST00000561076 HAUS4Q9H6D7 363 aa2□□□□□ -2.09
RTF1-207ENST00000561076 WDR26Q9H7D7 661 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ECT2Q9H8V3 914 aa2□□□□□ -2.09
RTF1-207ENST00000561076 COG4Q9H9E3 785 aa2□□□□□ -2.09
RTF1-207ENST00000561076 MSL2Q9HCI7 577 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ZNF304Q9HCX3 659 aa2□□□□□ -2.09
RTF1-207ENST00000561076 Q9N2J8 555 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TCF7L2Q9NQB0 619 aa2□□□□□ -2.09
RTF1-207ENST00000561076 FAM212BQ9NTI7 297 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 ETNK2Q9NVF9 386 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TBC1D13Q9NVG8 400 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GDAP2Q9NXN4 497 aa2□□□□□ -2.09
RTF1-207ENST00000561076 VSX1Q9NZR4 365 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 HACD3Q9P035 362 aa2□□□□□ -2.09
RTF1-207ENST00000561076 COPS7AQ9UBW8 275 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ADAM29Q9UKF5 820 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GRID1Q9ULK0 1009 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TTC7AQ9ULT0 858 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 CLEC4AQ9UMR7 237 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PLA2G2DQ9UNK4 145 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CTNND2Q9UQB3 1225 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RUVBL2Q9Y230 463 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 PADI2Q9Y2J8 665 aa2□□□□□ -2.09
RTF1-207ENST00000561076 WBP11Q9Y2W2 641 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 ZBTB32Q9Y2Y4 487 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 PAM16Q9Y3D7 125 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RAP2CQ9Y3L5 183 aa2□□□□□ -2.09
RTF1-207ENST00000561076 MFHAS1Q9Y4C4 1052 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ASB3Q9Y575 518 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CLIC4Q9Y696 253 aa2□□□□□ -2.09
RTF1-207ENST00000561076 NSD2O96028 1365 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 KDRP35968 1356 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 DHX29Q7Z478 1369 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 ZNF804BA4D1E1 1349 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 C17orf102A2RUQ5 167 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CXorf65A6NEN9 183 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 TMEM202A6NGA9 273 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 C9orf118A6NHY6 69 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 ANKRD30BLA7E2S9 258 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CAPN14A8MX76 684 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 LACTBL1A8MY62 500 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 C1QTNF9BB2RNN3 333 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 SPECC1L-ADORA2AF8WAN1 911 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 STMND1H3BQB6 276 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 LGALS8O00214 317 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 CLIC1O00299 241 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 EEF2KO00418 725 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 RNASET2O00584 256 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 CXCL11O14625 94 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 LSM1O15116 133 aaKnown RBP1.99□□□□□ -2.09
RTF1-207ENST00000561076 FLRT2O43155 660 aa1.99□□□□□ -2.09
RTF1-207ENST00000561076 MED7O43513 233 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms