RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 MFAP4P55083 255 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ACTR1AP61163 376 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 COPZ1P61923 177 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 YBX1P67809 324 aaKnown RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 GALK2Q01415 458 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 CDC20Q12834 499 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 RAB39AQ14964 217 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PRR23CQ6ZRP0 262 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PLD5Q8N7P1 536 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SH3YL1Q96HL8 342 aaPredicted RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 METTL2AQ96IZ6 378 aaKnown RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ZC3H10Q96K80 434 aaKnown RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 RILPQ96NA2 401 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PKP2Q99959 881 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 MYOCQ99972 504 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 FUZQ9BT04 418 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SCNM1Q9BWG6 230 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 TEX12Q9BXU0 123 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 ANKRD60Q9BZ19 345 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SCPEP1Q9HB40 452 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SYTL2Q9HCH5 934 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 HMG20AQ9NP66 347 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 RPRD1BQ9NQG5 326 aaKnown RBP6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC35C2Q9NQQ7 365 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 RXFP3Q9NSD7 469 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 TAS2R14Q9NYV8 317 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 MOCS1Q9NZB8 636 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 RBPJLQ9UBG7 517 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 MAD2L2Q9UI95 211 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 MYO3BQ8WXR4 1341 aa6.64□□□□□ -1.35
TSPAN3-209ENST00000560715 PRSS51A0A1B0GVH4 220 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 LIPT2A6NK58 231 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 EVPLLA8MZ36 301 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 hCG_2039718K7EN88 272 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 WEE2P0C1S8 567 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MAP4P27816 1152 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 EPHA3P29320 983 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 EEF1DP29692 281 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CSF2RBP32927 897 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 OPRL1P41146 370 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 ARCN1P48444 511 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 TMBIM6P55061 237 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MLLT10P55197 1068 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 RPL11P62913 178 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 GCNT1Q02742 428 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 PMS2P3Q13401 168 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 DNASE1L3Q13609 305 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 BOP1Q14137 746 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MESDQ14696 234 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM187BQ17R55 369 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC9B1Q4ZJI4 515 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 NEK5Q6P3R8 708 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 FRMD5Q7Z6J6 570 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CUZD1Q86UP6 607 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CAND1Q86VP6 1230 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 KDM1BQ8NB78 822 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC4A11Q8NBS3 891 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC22A17Q8WUG5 538 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 BCL7CQ8WUZ0 217 aaPredicted RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 LARP4BQ92615 738 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 RRNAD1Q96FB5 475 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MASTLQ96GX5 879 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 HDAC8Q9BY41 377 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SP140LQ9H930 580 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CPNE5Q9HCH3 593 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 TESMINQ9Y4I5 508 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SNED1Q8TER0 1413 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 TRIM77I1YAP6 450 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 NME6O75414 186 aaPredicted RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 KLKB1P03952 638 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CAPN1P07384 714 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 TYMPP19971 482 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 RAB6AP20340 208 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SERPINB1P30740 379 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 PSMC2P35998 433 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 NOVP48745 357 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SESN2P58004 480 aaPredicted RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MRPS22P82650 360 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 IFITM3Q01628 133 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 ELP6Q0PNE2 266 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 NME3Q13232 169 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 POU6F1Q14863 301 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MGAT5BQ3V5L5 792 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 LRRC8DQ7L1W4 858 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 RASGRP3Q8IV61 690 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM185AQ8N0U4 392 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 GMCL1P1Q8NEA9 526 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 ATG4AQ8WYN0 398 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 DCPSQ96C86 337 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CMTM5Q96DZ9 223 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CFAP36Q96G28 342 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SNX18Q96RF0 628 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 TMEM47Q9BQJ4 181 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF717Q9BY31 904 aaPredicted RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 NAA50Q9GZZ1 169 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 RC3H2Q9HBD1 1191 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 ATP13A2Q9NQ11 1180 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 XPNPEP1Q9NQW7 623 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 TNFSF13BQ9Y275 285 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SIT1Q9Y3P8 196 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms