RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TMED2Q15363 201 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 PAPD7Q5XG87 772 aaKnown RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 CYB5D1Q6P9G0 228 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 XKR5Q6UX68 686 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 PRSS42Q7Z5A4 293 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 VASH2Q86V25 355 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 CAND1Q86VP6 1230 aaKnown RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 RASGRP3Q8IV61 690 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 KRT222Q8N1A0 295 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 BMPERQ8N8U9 685 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 SIDT2Q8NBJ9 832 aaKnown RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 MCUQ8NE86 351 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 CFAP61Q8NHU2 1237 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 ZNF669Q96BR6 464 aaPredicted RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 RNF31Q96EP0 1072 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 SERPINB12Q96P63 405 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 MAP3K3Q99759 626 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 ZPBPQ9BS86 351 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 B3GNT4Q9C0J1 378 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 RAB33BQ9H082 229 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 MVB12BQ9H7P6 319 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 APMAPQ9HDC9 416 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 FBXO8Q9NRD0 319 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 SOHLH2Q9NX45 425 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 EPHA6Q9UF33 1036 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 PCDHGA3Q9Y5H0 932 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 IGHV5-51A0A0C4DH38 117 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 MAGEB16A2A368 324 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 CDH3P22223 829 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 CCR7P32248 378 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 DR1Q01658 176 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 PCGF5Q86SE9 256 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 HOOK3Q86VS8 718 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 AMIGO1Q86WK6 493 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 NAT8LQ8N9F0 302 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 OR52E1Q8NGJ3 308 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 OR5AR1Q8NGP9 310 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 ASZ1Q8WWH4 475 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 UBXN4Q92575 508 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 PANX3Q96QZ0 392 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 TRIM56Q9BRZ2 755 aaKnown RBP12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 CARD6Q9BX69 1037 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 ULBP3Q9BZM4 244 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 TRIT1Q9H3H1 467 aaKnown RBP12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 PRORYQ9H606 182 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 XKR8Q9H6D3 395 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 IL1RAPL1Q9NZN1 696 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 NEU2Q9Y3R4 380 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 RPS6KL1Q9Y6S9 549 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 NBEAQ8NFP9 2946 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 ZFHX4Q86UP3 3567 aa12.62□□□□□ -0.39
CTDSPL2-209ENST00000560620 SLC5A10A0PJK1 596 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 TLCD2A6NGC4 264 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 EIF4E1BA6NMX2 242 aaKnown RBP12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 MAP3K7O43318 606 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 KDM1AO60341 852 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 NELFEP18615 380 aaKnown RBP12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 FMO4P31512 558 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 ABRQ12979 859 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 SRSF6Q13247 344 aaKnown RBP12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 TUBB3Q13509 450 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 PTK6Q13882 451 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 KCNAB1Q14722 419 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 ANKRD20A4Q4UJ75 823 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 ZNF658BQ4V348 819 aaPredicted RBP12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 TMTC4Q5T4D3 741 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 RNF187Q5TA31 235 aaPredicted RBP12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 IZUMO3Q5VZ72 239 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 KIAA0930Q6ICG6 404 aaPredicted RBP12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 NEPROQ6NW34 567 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 OTOAQ7RTW8 1153 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 LRRC6Q86X45 466 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 PPP1R3BQ86XI6 285 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 CREG2Q8IUH2 290 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 TBC1D21Q8IYX1 336 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 CACNA2D3Q8IZS8 1091 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 KLHL6Q8WZ60 621 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 RUNDC3BQ96NL0 473 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 CD180Q99467 661 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 PDE7BQ9NP56 450 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 PCYOX1Q9UHG3 505 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 POLG2Q9UHN1 485 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 CRYL1Q9Y2S2 319 aa12.61□□□□□ -0.39
CTDSPL2-209ENST00000560620 SDK2Q58EX2 2172 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 TEX51A0A1B0GUA7 166 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 FAM237BA0A1B0GVD1 139 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 C2orf74A8MZ97 194 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 BHMG1C9JSJ3 638 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 E5RI56 91 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 MATN2O00339 956 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 BTN3A1O00481 513 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 DNALI1O14645 258 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 KPNA5O15131 536 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 RAD1O60671 282 aa12.6□□□□□ -0.39
CTDSPL2-209ENST00000560620 STK17BO94768 372 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms