RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 FLNAP21333 2647 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 CCDC66A2RUB6 948 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 GSAPA4D1B5 854 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 KCNK1O00180 336 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 PCDH17O14917 1159 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 GPR39O43194 453 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 UGT1A9O60656 530 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 TPM2P07951 284 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 CCDC172P0C7W6 258 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 GZMAP12544 262 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 PVRP15151 417 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 UGT1A6P19224 532 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 CDK11BP21127 795 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 UGT1A1P22309 533 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 UGT1A4P22310 534 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 FANCCQ00597 558 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 GBE1Q04446 702 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 SLC10A2Q12908 348 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 ZBTB17Q13105 803 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 DPYSL3Q14195 570 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 SLC9A5Q14940 896 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 NR1I3Q14994 352 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 TLR1Q15399 786 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 AGAP7PQ5VUJ5 663 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 PRAMEF13Q5VWM6 474 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 RHBDD2Q6NTF9 364 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 MRPL14Q6P1L8 145 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 BEND7Q8N7W2 519 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 RMDN2Q96LZ7 410 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 AGAP4Q96P64 663 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 NRTNQ99748 197 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 UGT1A7Q9HAW7 530 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 UGT1A10Q9HAW8 530 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 UGT1A8Q9HAW9 530 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 IL26Q9NPH9 171 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 SUCOQ9UBS9 1254 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 NDOR1Q9UHB4 597 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 FBXL4Q9UKA2 621 aa12.39□□□□□ -0.43
RABGGTA-213ENST00000560127 MATN2O00339 956 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 BTN3A3O00478 584 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 HCRTR1O43613 425 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 CD63P08962 238 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 SSTR2P30874 369 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 DCDP81605 110 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 PIGHQ14442 188 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 PRKD1Q15139 912 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 PCSK7Q16549 785 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 LDLRAP1Q5SW96 308 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 RPUSD3Q6P087 351 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 CDH24Q86UP0 819 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 GPR135Q8IZ08 494 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 CATSPER1Q8NEC5 780 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 DDHD1Q8NEL9 900 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 IMP4Q96G21 291 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 BTBD6Q96KE9 485 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 TRIM56Q9BRZ2 755 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 ZCCHC2Q9C0B9 1178 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 MRPL47Q9HD33 250 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 IFT80Q9P2H3 777 aaPredicted RBP12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 ACSL5Q9ULC5 683 aa12.38□□□□□ -0.43
RABGGTA-213ENST00000560127 SCN2AQ99250 2005 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 TRGV8A0A0C4DH27 118 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 MGAT4DA6NG13 374 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 C19orf84I3L1E1 186 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 BTN3A1O00481 513 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■□□□□ 11
RABGGTA-213ENST00000560127 CCL21O00585 134 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 MAP3K7O43318 606 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 OR2B3O76000 313 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 CTSBP07858 339 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 MX2P20592 715 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 NDUFS1P28331 727 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 HMGCLP35914 325 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 IFI35P80217 286 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 ATP13A4Q4VNC1 1196 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 GPRC6AQ5T6X5 926 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 PQLC3Q8N755 202 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 NIPA2Q8N8Q9 360 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 CCNYQ8ND76 341 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 ACVR1CQ8NER5 493 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 ANKRD20A12PQ8NF67 263 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 OR2L2Q8NH16 312 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 PROKR1Q8TCW9 393 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 DTX3LQ8TDB6 740 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 NAT14Q8WUY8 206 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 LCN9Q8WX39 176 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 NR4A3Q92570 626 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 TADA1Q96BN2 335 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 TAAR6Q96RI8 345 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 AP1M1Q9BXS5 423 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 CEP41Q9BYV8 373 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 SPRTNQ9H040 489 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 SRMSQ9H3Y6 488 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 HAUS4Q9H6D7 363 aa12.37□□□□□ -0.43
RABGGTA-213ENST00000560127 EPS8L2Q9H6S3 715 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms