RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 GNAI2P04899 355 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 STSP08842 583 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 SPARCP09486 303 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 GNAT1P11488 350 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 GFAPP14136 432 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PNLIPP16233 465 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 NR1D1P20393 614 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PRPS1L1P21108 318 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ACP1P24666 158 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CD40P25942 277 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 GSTM2P28161 218 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CD40LGP29965 261 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CCND3P30281 292 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 VIPR1P32241 457 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 MSX2P35548 267 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CD79BP40259 229 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 NAA10P41227 235 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CDKN2CP42773 168 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 GPD2P43304 727 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ALDH1A3P47895 512 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 NME5P56597 212 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PCBP3P57721 371 aaKnown RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 DCDC1P59894 354 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 MAGOHP61326 146 aaKnown RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 RPS16P62249 146 aaKnown RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ARF6P62330 175 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 IRF9Q00978 393 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 GHRHRQ02643 423 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 TAP1Q03518 808 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 FCHO2Q0JRZ9 810 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 SLAQ13239 276 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 FLOT2Q14254 428 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 VMACQ2NL98 169 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 DPY19L1Q2PZI1 675 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 P3H1Q32P28 736 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 C20orf194Q5TEA3 1177 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 C18orf63Q68DL7 685 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 JADE1Q6IE81 842 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CDC73Q6P1J9 531 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 KLHL35Q6PF15 583 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 KCTD8Q6ZWB6 473 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 SLC24A5Q71RS6 500 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 MTSS1LQ765P7 747 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 TRMT11Q7Z4G4 463 aaKnown RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PAQR7Q86WK9 346 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PPP1R3BQ86XI6 285 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 TICAM1Q8IUC6 712 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CCDC103Q8IW40 242 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 TIGD4Q8IY51 512 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 LINC00518Q8N0U6 118 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 TRAM1L1Q8N609 369 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 LZTR1Q8N653 840 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 KDM1BQ8NB78 822 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 SLC17A8Q8NDX2 589 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 HCAR2Q8TDS4 363 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 MZB1Q8WU39 189 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 FIG4Q92562 907 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 NTAN1Q96AB6 310 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 NMD3Q96D46 503 aaKnown RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 RAX2Q96IS3 184 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 KREMEN1Q96MU8 473 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ZNF578Q96N58 590 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CLIC6Q96NY7 704 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 DGAT2Q96PD7 388 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PCYT2Q99447 389 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PIGQQ9BRB3 760 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CACNG6Q9BXT2 260 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ANGPTL4Q9BY76 406 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 IL22Q9GZX6 179 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ZMYND12Q9H0C1 365 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ATG10Q9H0Y0 220 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 RANBP3Q9H6Z4 567 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 G6PC2Q9NQR9 355 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PNO1Q9NRX1 252 aaKnown RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 SLC6A13Q9NSD5 602 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 SACM1LQ9NTJ5 587 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 UFSP2Q9NUQ7 469 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 RHBDL2Q9NX52 303 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ERVK13-1Q9NX77 482 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ERAP1Q9NZ08 941 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 DLGAP2Q9P1A6 1054 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 LPAR3Q9UBY5 353 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ZNF70Q9UC06 446 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CPA4Q9UI42 421 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 GMEB2Q9UKD1 530 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 TRPC5Q9UL62 973 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 MTO1Q9Y2Z2 717 aaKnown RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PCDHA10Q9Y5I2 948 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 PCDHAC2Q9Y5I4 1007 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 HS3ST4Q9Y661 456 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 ZNF644Q9H582 1327 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 CECR2Q9BXF3 1484 aa4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 BAZ1BQ9UIG0 1483 aaKnown RBP4.43□□□□□ -1.7
HMGB3P26-201ENST00000560051 POLR3AO14802 1390 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P26-201ENST00000560051 VWA3AA6NCI4 1184 aa4.42□□□□□ -1.7
HMGB3P26-201ENST00000560051 NPIPB15A6NHN6 443 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P26-201ENST00000560051 PCP4L1A6NKN8 68 aa4.42□□□□□ -1.7
HMGB3P26-201ENST00000560051 CDRT15L2A8MXV6 281 aa4.42□□□□□ -1.7
HMGB3P26-201ENST00000560051 KCNJ18B7U540 433 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms