RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CCL4P13236 92 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 AMD1P17707 334 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 CAPZBP47756 277 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 CALCOCO2Q13137 446 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 PLCL1Q15111 1095 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 RNF187Q5TA31 235 aaPredicted RBP18.22■□□□□ 0.51
CASC4-209ENST00000559222 WDR74Q6RFH5 385 aaPredicted RBP18.22■□□□□ 0.51
CASC4-209ENST00000559222 LRRC6Q86X45 466 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 RBM12BQ8IXT5 1001 aaKnown RBP18.22■□□□□ 0.51
CASC4-209ENST00000559222 SLC22A15Q8IZD6 547 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 MMGT1Q8N4V1 131 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 LMNTD1Q8N9Z9 388 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 KIF18AQ8NI77 898 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 FBXO25Q8TCJ0 367 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 TFGQ92734 400 aaPredicted RBP18.22■□□□□ 0.51
CASC4-209ENST00000559222 PPM1MQ96MI6 270 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 TGM7Q96PF1 710 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 TCF12Q99081 682 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 XKR8Q9H6D3 395 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 INTS10Q9NVR2 710 aaKnown RBP18.22■□□□□ 0.51
CASC4-209ENST00000559222 PDP2Q9P2J9 529 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 PLAGL1Q9UM63 463 aa18.22■□□□□ 0.51
CASC4-209ENST00000559222 UTP11Q9Y3A2 253 aaKnown RBP18.22■□□□□ 0.51
CASC4-209ENST00000559222 CHD6Q8TD26 2715 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 IFRD1O00458 451 aaPredicted RBP18.21■□□□□ 0.51
CASC4-209ENST00000559222 CAPN5O15484 640 aaPredicted RBP18.21■□□□□ 0.51
CASC4-209ENST00000559222 TTC4O95801 387 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 C9P02748 559 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 PKMP14618 531 aaKnown RBP18.21■□□□□ 0.51
CASC4-209ENST00000559222 LSSP48449 732 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 CD151P48509 253 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 CARSP49589 748 aaKnown RBP18.21■□□□□ 0.51
CASC4-209ENST00000559222 PGGT1BP53609 377 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 PLTPP55058 493 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 FAM92BQ6ZTR7 304 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 ZBED8Q8IZ13 594 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 FBXO39Q8N4B4 442 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 KDF1Q8NAX2 398 aaPredicted RBP18.21■□□□□ 0.51
CASC4-209ENST00000559222 C2CD4AQ8NCU7 369 aaPredicted RBP18.21■□□□□ 0.51
CASC4-209ENST00000559222 BBOF1Q8ND07 529 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 OR52E1Q8NGJ3 308 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 WDR36Q8NI36 951 aaKnown RBP18.21■□□□□ 0.51
CASC4-209ENST00000559222 TMEM159Q96B96 161 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 NDNQ99608 321 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 FAM167BQ9BTA0 163 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 STRADBQ9C0K7 418 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 RAB17Q9H0T7 212 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 SAYSD1Q9NPB0 183 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 OCIAD1Q9NX40 245 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 PISDQ9UG56 409 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 DMGDHQ9UI17 866 aaKnown RBP18.21■□□□□ 0.51
CASC4-209ENST00000559222 ZMIZ1Q9ULJ6 1067 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 NFS1Q9Y697 457 aa18.21■□□□□ 0.51
CASC4-209ENST00000559222 OR6C74A6NCV1 312 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 PLD2O14939 933 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 ZW10O43264 779 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 TNFSF15O95150 251 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 ESR1P03372 595 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 ADARP55265 1226 aaKnown RBP18.2■□□□□ 0.5
CASC4-209ENST00000559222 TIAL1Q01085 375 aaKnown RBP eCLIP18.2■□□□□ 0.5
CASC4-209ENST00000559222 ABRQ12979 859 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 KRT33BQ14525 404 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 GBX1Q14549 363 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 CLPPQ16740 277 aaPredicted RBP18.2■□□□□ 0.5
CASC4-209ENST00000559222 RBM20Q5T481 1227 aaKnown RBP18.2■□□□□ 0.5
CASC4-209ENST00000559222 UBAP2Q5T6F2 1119 aaKnown RBP18.2■□□□□ 0.5
CASC4-209ENST00000559222 IRGCQ6NXR0 463 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 FBXO38Q6PIJ6 1188 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 ARHGAP22Q7Z5H3 698 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 CNTN4Q8IWV2 1026 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 SIDT2Q8NBJ9 832 aaKnown RBP18.2■□□□□ 0.5
CASC4-209ENST00000559222 OR4E2Q8NGC2 313 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 CFAP61Q8NHU2 1237 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 LRRC39Q96DD0 335 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 RNF31Q96EP0 1072 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 NAT9Q9BTE0 207 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 SMYD2Q9NRG4 433 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 ICKQ9UPZ9 632 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 ASF1AQ9Y294 204 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 RAXQ9Y2V3 346 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 PSAT1Q9Y617 370 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 CACNA1GO43497 2377 aa18.2■□□□□ 0.5
CASC4-209ENST00000559222 SNRNP200O75643 2136 aaKnown RBP18.2■□□□□ 0.5
CASC4-209ENST00000559222 BTN3A3O00478 584 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 SLCO2B1O94956 709 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 TUBB4AP04350 444 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 APOA4P06727 396 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 BDKRB1P46663 353 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 CLCN7P51798 805 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 GUCY2DQ02846 1103 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 CBLBQ13191 982 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 CUL1Q13616 776 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 ST3GAL2Q16842 350 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 CCSMST1Q4G0I0 132 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 ACSBG2Q5FVE4 666 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 TEDDM1Q5T9Z0 273 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 PROSER1Q86XN7 944 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 ACVR1CQ8NER5 493 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 GRAMD1AQ96CP6 724 aa18.19■□□□□ 0.5
CASC4-209ENST00000559222 C9orf72Q96LT7 481 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms