RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 GBX1Q14549 363 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 KLHL38Q2WGJ6 581 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 TTLL9Q3SXZ7 439 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 ACSBG2Q5FVE4 666 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 GRTP1Q5TC63 336 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 CPNE9Q8IYJ1 553 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 SKA2Q8WVK7 121 aaPredicted RBP17.02■□□□□ 0.32
TPM1-214ENST00000558544 TFGQ92734 400 aaPredicted RBP17.02■□□□□ 0.32
TPM1-214ENST00000558544 INPP5DQ92835 1189 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 FERD3LQ96RJ6 166 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 SLC38A3Q99624 504 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 EPB41L4BQ9H329 900 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 SYNDIG1Q9H7V2 258 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 APOBEC2Q9Y235 224 aaKnown RBP17.02■□□□□ 0.32
TPM1-214ENST00000558544 MTO1Q9Y2Z2 717 aaKnown RBP17.02■□□□□ 0.32
TPM1-214ENST00000558544 VWA7Q9Y334 891 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 PCDHGA1Q9Y5H4 931 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 HEBP2Q9Y5Z4 205 aa17.02■□□□□ 0.32
TPM1-214ENST00000558544 ALDH4A1P30038 563 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 SPRP35270 261 aaPredicted RBP17.02■□□□□ 0.31
TPM1-214ENST00000558544 LIMK2P53671 638 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 OR1D5P58170 312 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 ABRQ12979 859 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 ILKQ13418 452 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 PDAP1Q13442 181 aaKnown RBP17.02■□□□□ 0.31
TPM1-214ENST00000558544 GPR18Q14330 331 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 KRT33BQ14525 404 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 NR1D2Q14995 579 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 UGT3A1Q6NUS8 523 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 TMEM26Q6ZUK4 368 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 SPRED1Q7Z699 444 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 PHC3Q8NDX5 983 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 CFAP61Q8NHU2 1237 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 AENQ8WTP8 325 aaKnown RBP17.02■□□□□ 0.31
TPM1-214ENST00000558544 UBLCP1Q8WVY7 318 aaPredicted RBP17.02■□□□□ 0.31
TPM1-214ENST00000558544 JPH3Q8WXH2 748 aaPredicted RBP17.02■□□□□ 0.31
TPM1-214ENST00000558544 SH3KBP1Q96B97 665 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 TBC1D10AQ9BXI6 508 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 SLC40A1Q9NP59 571 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 KCNK4Q9NYG8 393 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 KLHL42Q9P2K6 505 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 RUVBL2Q9Y230 463 aaKnown RBP17.02■□□□□ 0.31
TPM1-214ENST00000558544 ASF1AQ9Y294 204 aa17.02■□□□□ 0.31
TPM1-214ENST00000558544 POC1B-GALNT4F8VUJ3 575 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 DKK1O94907 266 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 RPLP0P05388 317 aaKnown RBP17.01■□□□□ 0.31
TPM1-214ENST00000558544 CD9P21926 228 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 ATP5DP30049 168 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 PPM1FP49593 454 aaPredicted RBP17.01■□□□□ 0.31
TPM1-214ENST00000558544 TAS2R39P59534 338 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 SLC29A2Q14542 456 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 ZNF460Q14592 562 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 PAQR3Q6TCH7 311 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 DHRS13Q6UX07 377 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 RBM12BQ8IXT5 1001 aaKnown RBP17.01■□□□□ 0.31
TPM1-214ENST00000558544 OR5AR1Q8NGP9 310 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 PAFAH2Q99487 392 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 GPR22Q99680 433 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 HGH1Q9BTY7 390 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.01■□□□□ 0.31
TPM1-214ENST00000558544 CAB39LQ9H9S4 337 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 RAB21Q9UL25 225 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 SLC39A10Q9ULF5 831 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 NFS1Q9Y697 457 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 COLEC10Q9Y6Z7 277 aa17.01■□□□□ 0.31
TPM1-214ENST00000558544 EXOC1LA0A1B0GW35 172 aa17■□□□□ 0.31
TPM1-214ENST00000558544 LILRA5A6NI73 299 aa17■□□□□ 0.31
TPM1-214ENST00000558544 B4GAT1O43505 415 aa17■□□□□ 0.31
TPM1-214ENST00000558544 INHBAP08476 426 aa17■□□□□ 0.31
TPM1-214ENST00000558544 ITGA2BP08514 1039 aa17■□□□□ 0.31
TPM1-214ENST00000558544 SKIV2L2P42285 1042 aaKnown RBP17■□□□□ 0.31
TPM1-214ENST00000558544 MAPK9P45984 424 aa17■□□□□ 0.31
TPM1-214ENST00000558544 GPR3P46089 330 aa17■□□□□ 0.31
TPM1-214ENST00000558544 CLDN6P56747 220 aa17■□□□□ 0.31
TPM1-214ENST00000558544 CCL7P80098 99 aa17■□□□□ 0.31
TPM1-214ENST00000558544 ILF2Q12905 390 aaKnown RBP17■□□□□ 0.31
TPM1-214ENST00000558544 PLCL1Q15111 1095 aa17■□□□□ 0.31
TPM1-214ENST00000558544 AMZ1Q400G9 498 aa17■□□□□ 0.31
TPM1-214ENST00000558544 EMBQ6PCB8 327 aa17■□□□□ 0.31
TPM1-214ENST00000558544 DGLUCYQ7Z3D6 616 aa17■□□□□ 0.31
TPM1-214ENST00000558544 PIWIL4Q7Z3Z4 852 aaKnown RBP17■□□□□ 0.31
TPM1-214ENST00000558544 SLC44A1Q8WWI5 657 aa17■□□□□ 0.31
TPM1-214ENST00000558544 ABCG4Q9H172 646 aa17■□□□□ 0.31
TPM1-214ENST00000558544 TRIT1Q9H3H1 467 aaKnown RBP17■□□□□ 0.31
TPM1-214ENST00000558544 LRRN3Q9H3W5 708 aa17■□□□□ 0.31
TPM1-214ENST00000558544 MVB12BQ9H7P6 319 aa17■□□□□ 0.31
TPM1-214ENST00000558544 UCK1Q9HA47 277 aa17■□□□□ 0.31
TPM1-214ENST00000558544 IGHV1OR21-1A0A087WYE8 117 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 A0A1W2PQM1 296 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 OPA1O60313 960 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 CBSLP0DN79 551 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 ENO3P13929 434 aaPredicted RBP16.99■□□□□ 0.31
TPM1-214ENST00000558544 NDUFS1P28331 727 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 CBSP35520 551 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 BDKRB1P46663 353 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 SLC12A2P55011 1212 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 E2F1Q01094 437 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 POU4F1Q01851 419 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 PRKG2Q13237 762 aa16.99■□□□□ 0.31
TPM1-214ENST00000558544 BMPR2Q13873 1038 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms