RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 ERBB2P04626 1255 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 CHRNA3P32297 505 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 CLDN2P57739 230 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 ERVPABLB-1P60509 514 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 CFHR1Q03591 330 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 MTA1Q13330 715 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 ZNF177Q13360 481 aaPredicted RBP6.09□□□□□ -1.43
CLPX-202ENST00000558103 MORC3Q14149 939 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 GBX1Q14549 363 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 HLXQ14774 488 aaPredicted RBP6.09□□□□□ -1.43
CLPX-202ENST00000558103 GRM3Q14832 879 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 PTPN20Q4JDL3 420 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 ALFQ53S48 1182 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 EFHC1Q5JVL4 640 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 SEL1L3Q68CR1 1132 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 ISM2Q6H9L7 571 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 KLHL10Q6JEL2 608 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 C22orf39Q6P5X5 142 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 GJB7Q6PEY0 223 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 KYAT3Q6YP21 454 aaKnown RBP6.09□□□□□ -1.43
CLPX-202ENST00000558103 ERN2Q76MJ5 926 aaKnown RBP6.09□□□□□ -1.43
CLPX-202ENST00000558103 ENOSF1Q7L5Y1 443 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 SLC26A9Q7LBE3 791 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 LSMEM2Q8N112 164 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 DCAF4L2Q8NA75 395 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 C1orf131Q8NDD1 294 aaKnown RBP6.09□□□□□ -1.43
CLPX-202ENST00000558103 NELFBQ8WX92 580 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 SHC3Q92529 594 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 KLK6Q92876 244 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 TMEM125Q96AQ2 219 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 VOPP1Q96AW1 172 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 ZG16BQ96DA0 208 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 WBP1Q96G27 269 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 PPP1R13BQ96KQ4 1090 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 BMFQ96LC9 184 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 NPY6RQ99463 290 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 LGMNQ99538 433 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 CALN1Q9BXU9 219 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 SIK2Q9H0K1 926 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 SYNPO2LQ9H987 977 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 USP29Q9HBJ7 922 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 UBE2TQ9NPD8 197 aaPredicted RBP6.09□□□□□ -1.43
CLPX-202ENST00000558103 PIGVQ9NUD9 493 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 ARHGEF38Q9NXL2 777 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 KCTD5Q9NXV2 234 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 COX16Q9P0S2 106 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 SLC12A6Q9UHW9 1150 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 VPS51Q9UID3 782 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 COMMD10Q9Y6G5 202 aa6.09□□□□□ -1.43
CLPX-202ENST00000558103 ZFC3H1O60293 1989 aaKnown RBP6.09□□□□□ -1.43
CLPX-202ENST00000558103 IGLV3-10A0A075B6K4 115 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 A0A0D9SEW6 157 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 SPTY2D1-AS1A0A0U1RR47 76 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 A0A1W2PNU3 283 aaPredicted RBP6.08□□□□□ -1.44
CLPX-202ENST00000558103 POM121BA6NF01 834 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 A6NNZ2 444 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 M0QYT0 321 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 KPNA3O00505 521 aaPredicted RBP6.08□□□□□ -1.44
CLPX-202ENST00000558103 TOR1BO14657 336 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 SCAMP1O15126 338 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 USP12O75317 370 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 CSO75390 466 aaKnown RBP6.08□□□□□ -1.44
CLPX-202ENST00000558103 NEBLO76041 1014 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ADCY5O95622 1261 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 GNA14O95837 355 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 CSF2P04141 144 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 RHOCP08134 193 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ALPPL2P10696 532 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 MYF5P13349 255 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ADRB3P13945 408 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ZNF18P17022 549 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 TGM2P21980 687 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 RRM1P23921 792 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 AKT2P31751 481 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 CXCR3P49682 368 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 NEK3P51956 506 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ZNF135P52742 658 aaPredicted RBP6.08□□□□□ -1.44
CLPX-202ENST00000558103 PDX1P52945 283 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 UCNP55089 124 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 TMPRSS3P57727 454 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 HNRNPKP61978 463 aaKnown RBP eCLIP6.08□□□□□ -1.44
CLPX-202ENST00000558103 KRT83P78385 493 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ARF5P84085 180 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 RHDQ02161 417 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 NME3Q13232 169 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 FGL2Q14314 439 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 FZD2Q14332 565 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ZNF542PQ5EBM4 170 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 BRMS1LQ5PSV4 323 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 OR6B2Q6IFH4 312 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 KIAA1161Q6NSJ0 714 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 DPY19L3Q6ZPD9 716 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 C11orf57Q6ZUT1 292 aaPredicted RBP6.08□□□□□ -1.44
CLPX-202ENST00000558103 MICALCLQ6ZW33 695 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 BNIPLQ7Z465 357 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 SETD3Q86TU7 594 aaPredicted RBP6.08□□□□□ -1.44
CLPX-202ENST00000558103 PARGQ86W56 976 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ADGRG5Q8IZF4 528 aa6.08□□□□□ -1.44
CLPX-202ENST00000558103 ATP11CQ8NB49 1132 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms