RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 OSGEPL1Q9H4B0 414 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 STN1Q9H668 368 aaKnown RBP12.14□□□□□ -0.47
TPM1-209ENST00000558072 MVB12BQ9H7P6 319 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 PARVBQ9HBI1 364 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 DNAJC28Q9NX36 388 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 NUDT4Q9NZJ9 180 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 APOBEC3BQ9UH17 382 aaKnown RBP12.14□□□□□ -0.47
TPM1-209ENST00000558072 PNMA8BQ9ULN7 279 aaPredicted RBP12.14□□□□□ -0.47
TPM1-209ENST00000558072 SLC6A14Q9UN76 642 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 DOLKQ9UPQ8 538 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 OARD1Q9Y530 152 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 PCYT1BQ9Y5K3 369 aaPredicted RBP12.14□□□□□ -0.47
TPM1-209ENST00000558072 CSNK1G3Q9Y6M4 447 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 TMEM131Q92545 1883 aa12.14□□□□□ -0.47
TPM1-209ENST00000558072 LRP4O75096 1905 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 BPTFQ12830 3046 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 KIR2DS5A0A0G2JLQ3 304 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 A0A0G2JNG1 304 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 PDZK1P1A8MUH7 402 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 H3BQF6 201 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 GFYI3L273 518 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 KIR2DS3K7RE56 304 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 PSIP1O75475 530 aaKnown RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 MATN4O95460 622 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 CER1O95813 267 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 TSPAN12O95859 305 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 PROCP04070 461 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ANXA5P08758 320 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ATP5F1P24539 256 aaPredicted RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 SERPINB5P36952 375 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ACTR1BP42025 376 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 RXRGP48443 463 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 CSNK1EP49674 416 aaKnown RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 ACTR1AP61163 376 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 CTBSQ01459 385 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 EIF2B5Q13144 721 aaKnown RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 NFE2L1Q14494 772 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 KRT33BQ14525 404 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 KIR2DS5Q14953 304 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ZNF658BQ4V348 819 aaPredicted RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 TECRLQ5HYJ1 363 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ATG16L1Q676U5 607 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 LAIR1Q6GTX8 287 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 TCEAL6Q6IPX3 200 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ABRAXAS1Q6UWZ7 409 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 CYHR1Q6ZMK1 362 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 UBE2R2Q712K3 238 aaPredicted RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 TBC1D21Q8IYX1 336 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ANKRD42Q8N9B4 389 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 PPP1R14CQ8TAE6 165 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 DENND1AQ8TEH3 1009 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ANKRD49Q8WVL7 239 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 TFGQ92734 400 aaPredicted RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 TCEAL3Q969E4 200 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 RAD51AP1Q96B01 352 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 FAM136AQ96C01 138 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 CCDC138Q96M89 665 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 GPR78Q96P69 363 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 FAM111AQ96PZ2 611 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 RAB11FIP5Q9BXF6 653 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 TRIT1Q9H3H1 467 aaKnown RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 ALG9Q9H6U8 611 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 MRPL40Q9NQ50 206 aaKnown RBP12.13□□□□□ -0.47
TPM1-209ENST00000558072 TMEM216Q9P0N5 145 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 CDYLQ9Y232 598 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 DNAJC16Q9Y2G8 782 aa12.13□□□□□ -0.47
TPM1-209ENST00000558072 ZW10O43264 779 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 FOXD2O60548 495 aaPredicted RBP12.12□□□□□ -0.47
TPM1-209ENST00000558072 IPO13O94829 963 aaKnown RBP12.12□□□□□ -0.47
TPM1-209ENST00000558072 EPN2O95208 641 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 ALPPL2P10696 532 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 GRK2P25098 689 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 CTSKP43235 329 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 RPIAP49247 311 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 NFKB2Q00653 900 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 IRF9Q00978 393 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 BNC1Q01954 994 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 PLA2G4EQ3MJ16 856 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 ZNF542PQ5EBM4 170 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 PRAMEF14Q5SWL7 426 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 SULT1C3Q6IMI6 304 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 CAPRIN2Q6IMN6 1127 aaKnown RBP12.12□□□□□ -0.47
TPM1-209ENST00000558072 SLC23A3Q6PIS1 610 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 ZYG11AQ6WRX3 759 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 TAF8Q7Z7C8 310 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 TAX1BP1Q86VP1 789 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 NUDCD3Q8IVD9 361 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 DCUN1D3Q8IWE4 304 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 PLD6Q8N2A8 252 aaKnown RBP12.12□□□□□ -0.47
TPM1-209ENST00000558072 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 OR2I1PQ8NGU4 316 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 ATOH1Q92858 354 aaPredicted RBP12.12□□□□□ -0.47
TPM1-209ENST00000558072 SH3KBP1Q96B97 665 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 ELF4Q99607 663 aaPredicted RBP12.12□□□□□ -0.47
TPM1-209ENST00000558072 SLC30A3Q99726 388 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 PAIP2Q9BPZ3 127 aaKnown RBP12.12□□□□□ -0.47
TPM1-209ENST00000558072 OR52A5Q9H2C5 316 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 GALPQ9UBC7 116 aa12.12□□□□□ -0.47
TPM1-209ENST00000558072 COPG2Q9UBF2 871 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms