RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 LINC00523Q86TU6 105 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 SERPINA9Q86WD7 417 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 AMIGO1Q86WK6 493 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 FAM71DQ8N9W8 422 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 STYXQ8WUJ0 223 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 MRFAP1L1Q96HT8 127 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 TTC1Q99614 292 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 FAM118BQ9BPY3 351 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 DPH2Q9BQC3 489 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 COG4Q9H9E3 785 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 ACSS2Q9NR19 701 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 NLE1Q9NVX2 485 aaPredicted RBP13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 COL12A1Q99715 3063 aa13.23□□□□□ -0.29
SNRPA1-204ENST00000558020 BSNQ9UPA5 3926 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 IGLV3-16A0A075B6K0 115 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 RCCD1A6NED2 376 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 H7C0S8 307 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 KDM1AO60341 852 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 RAB40ALP0C0E4 278 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 ACRV1P26436 265 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 ARCN1P48444 511 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 VAV2P52735 878 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 PLOD1Q02809 727 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 KIF5AQ12840 1032 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 OLIG2Q13516 323 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 ZNF517Q6ZMY9 492 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 TMEM135Q86UB9 458 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 PHC3Q8NDX5 983 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 NAT14Q8WUY8 206 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 ALG3Q92685 438 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 TFGQ92734 400 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 N4BP2L2Q92802 583 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 DNAJC1Q96KC8 554 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 C17orf62Q9BQA9 187 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 SLC25A23Q9BV35 468 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 TLR10Q9BXR5 811 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 NLNQ9BYT8 704 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 OR52A5Q9H2C5 316 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 ACTR5Q9H9F9 607 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 AKIRIN1Q9H9L7 192 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 SNX7Q9UNH6 387 aa13.22□□□□□ -0.29
SNRPA1-204ENST00000558020 MAST4O15021 2626 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 TRBV5-4A0A0C4DH59 114 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 TMEM150CB9EJG8 249 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 LIN7AO14910 233 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 FTH1P02794 183 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 CD63P08962 238 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 TPH1P17752 444 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 AGXTP21549 392 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 STIP1P31948 543 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 NSG1P42857 185 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 CCL11P51671 97 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 ZNF75DP51815 510 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 GPS2Q13227 327 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 POU6F1Q14863 301 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 PLEKHS1Q5SXH7 462 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 LYPLAL1Q5VWZ2 237 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 KCTD11Q693B1 232 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 KLHDC8BQ8IXV7 354 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 GPR135Q8IZ08 494 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 DSELQ8IZU8 1212 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 LILRA3Q8N6C8 439 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 CLDN19Q8N6F1 224 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 EFCAB3Q8N7B9 438 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 LRRC57Q8N9N7 239 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 UBE2Q2Q8WVN8 375 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 CDKN2AIPNLQ96HQ2 116 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 PITPNM3Q9BZ71 974 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 LACRTQ9GZZ8 138 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 ING2Q9H160 280 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 CHST8Q9H2A9 424 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 SMARCAL1Q9NZC9 954 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 POLG2Q9UHN1 485 aa13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 PCDHGA9Q9Y5G4 932 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-204ENST00000558020 GRID2IPA4D2P6 1211 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 TTLL8A6PVC2 850 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 ERI2A8K979 691 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 C9J4A7 227 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 E7EQ34 232 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 BTN3A1O00481 513 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 CCL22O00626 93 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 VPS4BO75351 444 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 SHMT2P34897 504 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 PPARGP37231 505 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 RRADP55042 308 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 ITGA1P56199 1179 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 RPS18P62269 152 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 PRKG2Q13237 762 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 BOP1Q14137 746 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 FBXO38Q6PIJ6 1188 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 HPS6Q86YV9 775 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 SLC38A9Q8NBW4 561 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 OR52E1Q8NGJ3 308 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 TCTN2Q96GX1 697 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 BAG1Q99933 345 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 TCFL5Q9UL49 500 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 VPS4AQ9UN37 437 aa13.2□□□□□ -0.3
SNRPA1-204ENST00000558020 PLAAQ9Y263 795 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms