RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 KLHL42Q9P2K6 505 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 ATXN7L1Q9ULK2 861 aaPredicted RBP24.92■■□□□ 1.58
SMAD6-202ENST00000557916 ASF1AQ9Y294 204 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 DHRS7Q9Y394 339 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 TCEA3O75764 348 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 TOP3BO95985 862 aaKnown RBP24.91■■□□□ 1.58
SMAD6-202ENST00000557916 CD1CP29017 333 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 MAPK9P45984 424 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 ABRQ12979 859 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 TTLL9Q3SXZ7 439 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 USP53Q70EK8 1073 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 TMPRSS7Q7RTY8 843 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 ZC3HC1Q86WB0 502 aaKnown RBP24.91■■□□□ 1.58
SMAD6-202ENST00000557916 INPP5DQ92835 1189 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 SLC30A3Q99726 388 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 TAS2R13Q9NYV9 303 aa24.91■■□□□ 1.58
SMAD6-202ENST00000557916 ACSL3O95573 720 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 FAM153BP0C7A2 387 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 JUPP14923 745 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 GBX1Q14549 363 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 FAM153CQ494X1 144 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 UBAP2Q5T6F2 1119 aaKnown RBP24.9■■□□□ 1.58
SMAD6-202ENST00000557916 HECTD2Q5U5R9 776 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 UGT3A1Q6NUS8 523 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 RBM44Q6ZP01 1051 aaKnown RBP24.9■■□□□ 1.58
SMAD6-202ENST00000557916 GSPT2Q8IYD1 628 aaKnown RBP24.9■■□□□ 1.58
SMAD6-202ENST00000557916 PPM1NQ8N819 430 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 GIMAP7Q8NHV1 300 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 SKA2Q8WVK7 121 aaPredicted RBP24.9■■□□□ 1.58
SMAD6-202ENST00000557916 CPNE1Q99829 537 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 KIR3DX1Q9H7L2 352 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 SLC24A2Q9UI40 661 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 CLCA2Q9UQC9 943 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 VWA7Q9Y334 891 aa24.9■■□□□ 1.58
SMAD6-202ENST00000557916 D6RAR5 112 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 DUX1O43812 170 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 CPNE6O95741 557 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 TNFRSF8P28908 595 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 ATP5DP30049 168 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 SKIV2L2P42285 1042 aaKnown RBP24.89■■□□□ 1.58
SMAD6-202ENST00000557916 CDKN2DP55273 166 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 TIAL1Q01085 375 aaKnown RBP eCLIP24.89■■□□□ 1.58
SMAD6-202ENST00000557916 ILF2Q12905 390 aaKnown RBP24.89■■□□□ 1.58
SMAD6-202ENST00000557916 PLCL1Q15111 1095 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 ACSBG2Q5FVE4 666 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 FAM45BPQ6NSW5 357 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 OR5AR1Q8NGP9 310 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 CFAP61Q8NHU2 1237 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 FAM45AQ8TCE6 357 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 CD200R1Q8TD46 325 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 JPH3Q8WXH2 748 aaPredicted RBP24.89■■□□□ 1.58
SMAD6-202ENST00000557916 UBXN4Q92575 508 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 TRIT1Q9H3H1 467 aaKnown RBP24.89■■□□□ 1.58
SMAD6-202ENST00000557916 RHOJQ9H4E5 214 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 EPB41L1Q9H4G0 881 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 RDH14Q9HBH5 336 aa24.89■■□□□ 1.58
SMAD6-202ENST00000557916 TRMT6Q9UJA5 497 aaKnown RBP24.89■■□□□ 1.58
SMAD6-202ENST00000557916 TSR3Q9UJK0 312 aaKnown RBP24.89■■□□□ 1.58
SMAD6-202ENST00000557916 UBXN7O94888 489 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 MYBL2P10244 700 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 CD9P21926 228 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 PRKG2Q13237 762 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 SQSTM1Q13501 440 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 NAB1Q13506 487 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 CLPPQ16740 277 aaPredicted RBP24.88■■□□□ 1.57
SMAD6-202ENST00000557916 MAP9Q49MG5 647 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 PIM3Q86V86 326 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 SPNS2Q8IVW8 549 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 TBC1D21Q8IYX1 336 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 DCBLD1Q8N8Z6 715 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 ACVR1CQ8NER5 493 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 ELMO2Q96JJ3 720 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 DEPDC7Q96QD5 511 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 CYTH2Q99418 400 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 MCMBPQ9BTE3 642 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 HGH1Q9BTY7 390 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.88■■□□□ 1.57
SMAD6-202ENST00000557916 WASF3Q9UPY6 502 aa24.88■■□□□ 1.57
SMAD6-202ENST00000557916 V9GYY5 206 aaPredicted RBP24.88■■□□□ 1.57
SMAD6-202ENST00000557916 FAM95CA0A1B0GW59 222 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 MED19A0JLT2 244 aaPredicted RBP24.87■■□□□ 1.57
SMAD6-202ENST00000557916 FAM149AA5PLN7 773 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 PROS1P07225 676 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 TYRP1P17643 537 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 AMD1P17707 334 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 GP5P40197 560 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 EFTUD2Q15029 972 aaKnown RBP eCLIP24.87■■□□□ 1.57
SMAD6-202ENST00000557916 KLHL38Q2WGJ6 581 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 UNC5DQ6UXZ4 953 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 CACTIN-AS1Q8N1I8 211 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 OR5K2Q8NHB8 316 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 NCSTNQ92542 709 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 VPS39Q96JC1 886 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 FOPNLQ96NB1 174 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 NUDT22Q9BRQ3 303 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 FUT8Q9BYC5 575 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 ZMYND15Q9H091 742 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 ACSS3Q9H6R3 686 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 POLG2Q9UHN1 485 aa24.87■■□□□ 1.57
SMAD6-202ENST00000557916 RPN2P04844 631 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms