RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CDYLQ9Y232 598 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 VWA7Q9Y334 891 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 OR52A4PA6NMU1 304 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 D6RAR5 112 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 HGSO14964 777 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-234ENST00000557703 B4GAT1O43505 415 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 UBXN7O94888 489 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 RPLP0P05388 317 aaKnown RBP13.35□□□□□ -0.27
SHMT2-234ENST00000557703 CD1CP29017 333 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 PDHA2P29803 388 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 ECHS1P30084 290 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 SPRP35270 261 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-234ENST00000557703 GP5P40197 560 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 CLCN7P51798 805 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 GPX6P59796 221 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 CCL7P80098 99 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 POU4F1Q01851 419 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 GRTP1Q5TC63 336 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 TMEM71Q6P5X7 295 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 CNSTQ6PJW8 725 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 STRA8Q7Z7C7 330 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 ZC3HC1Q86WB0 502 aaKnown RBP13.35□□□□□ -0.27
SHMT2-234ENST00000557703 UNC5BQ8IZJ1 945 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 RAB42Q8N4Z0 105 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 ZBTB2Q8N680 514 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 ZDHHC12Q96GR4 267 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 C9orf72Q96LT7 481 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 RMDN2Q96LZ7 410 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 MCMBPQ9BTE3 642 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 RAB11FIP5Q9BXF6 653 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 SYTL2Q9HCH5 934 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 AKAP7Q9P0M2 348 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-234ENST00000557703 SLC24A2Q9UI40 661 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 TRMT6Q9UJA5 497 aaKnown RBP13.35□□□□□ -0.27
SHMT2-234ENST00000557703 PSMD13Q9UNM6 376 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 WASF3Q9UPY6 502 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 ASF1AQ9Y294 204 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 MSRB2Q9Y3D2 182 aa13.35□□□□□ -0.27
SHMT2-234ENST00000557703 CEP295Q9C0D2 2601 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 TRBV23OR9-2A0A075B6M9 112 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 IQCF5A8MTL0 148 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 MATN4O95460 622 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 ABHD2P08910 425 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 MPC1LP0DKB6 136 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 AMD1P17707 334 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 GABRB3P28472 473 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 HSD17B2P37059 387 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 ZFP36L1Q07352 338 aaKnown RBP13.34□□□□□ -0.27
SHMT2-234ENST00000557703 GPR18Q14330 331 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 KYNUQ16719 465 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 TEX35Q5T0J7 233 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 HES3Q5TGS1 186 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 ZNF549Q6P9A3 640 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 CCNI2Q6ZMN8 369 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-234ENST00000557703 DCUN1D3Q8IWE4 304 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 LILRA3Q8N6C8 439 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-234ENST00000557703 FBXO15Q8NCQ5 510 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-234ENST00000557703 UBXN4Q92575 508 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 RAD51AP1Q96B01 352 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 TSPAN17Q96FV3 270 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 LIN37Q96GY3 246 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-234ENST00000557703 PDLIM5Q96HC4 596 aaKnown RBP13.34□□□□□ -0.27
SHMT2-234ENST00000557703 FERD3LQ96RJ6 166 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 CD180Q99467 661 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 B3GNT4Q9C0J1 378 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 NRSN2Q9GZP1 204 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 OR6C2Q9NZP2 312 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 RABGEF1Q9UJ41 708 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 ANGPTL2Q9UKU9 493 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 NFU1Q9UMS0 254 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 ENTPD2Q9Y5L3 495 aa13.34□□□□□ -0.27
SHMT2-234ENST00000557703 A0A1W2PQM1 296 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 CCDC189A1A4V9 331 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 NIPSNAP2O75323 286 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 FKBP9O95302 570 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 PROS1P07225 676 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 MYF5P13349 255 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 KCNA4P22459 653 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 SHMT2P34897 504 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 CAPZBP47756 277 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 PREPP48147 710 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 LIMK2P53671 638 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 OR1D5P58170 312 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 MPP1Q00013 466 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 ISXQ2M1V0 245 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 KLHL38Q2WGJ6 581 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 ZNF789Q5FWF6 425 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 WDR93Q6P2C0 686 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 CYB5D1Q6P9G0 228 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 IGF2-ASQ6U949 168 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 OOSP2Q86WS3 158 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 SFTPA2Q8IWL1 248 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 LSMEM2Q8N112 164 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 CHCHD4Q8N4Q1 142 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 NKAPQ8N5F7 415 aaKnown RBP13.33□□□□□ -0.28
SHMT2-234ENST00000557703 PNPLA1Q8N8W4 532 aa13.33□□□□□ -0.28
SHMT2-234ENST00000557703 Q8N9G6 341 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-234ENST00000557703 SPDYE1Q8NFV5 336 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-234ENST00000557703 CD200R1Q8TD46 325 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms