RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 RNGTTO60942 597 aaKnown RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 PSIP1O75475 530 aaKnown RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 STK16O75716 305 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 CATP04040 527 aaKnown RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 ZNF8P17098 575 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 MAP4P27816 1152 aaKnown RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 MAGEA9P43362 315 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 ADPRHP54922 357 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 IRF4Q15306 451 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 ZNF658BQ4V348 819 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 LRRC70Q7Z2Q7 622 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 TEX9Q8N6V9 391 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 OR2L2Q8NH16 312 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 RPLP0P6Q8NHW5 317 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 HM13Q8TCT9 377 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 ATL1Q8WXF7 558 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 ATP6V1E2Q96A05 226 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 ESAMQ96AP7 390 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 SLC7A6OSQ96CW6 309 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 CMTM5Q96DZ9 223 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 LENG8Q96PV6 779 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 RAB3IPQ96QF0 476 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 CDX2Q99626 313 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 TMEM79Q9BSE2 394 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 TEX101Q9BY14 249 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 SLC17A9Q9BYT1 436 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 WDR26Q9H7D7 661 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 NOL11Q9H8H0 719 aaKnown RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 PHPT1Q9NRX4 125 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 ZFR2Q9UPR6 939 aaKnown RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 ASB1Q9Y576 335 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 DNMT3AQ9Y6K1 912 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 TBC1D3DA0A087WVF3 549 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3IA0A087WXS9 549 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3EA0A087X179 549 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3KA0A087X1G2 549 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3FA6NER0 549 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 MGAT4DA6NG13 374 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TMEM202A6NGA9 273 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3LB9A6J9 549 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 H3BM21 787 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 CHUKO15111 745 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 DCXO43602 365 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 KATNA1O75449 491 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 POP7O75817 140 aaKnown RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3HP0C7X1 549 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 EZRP15311 586 aaKnown RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 FOSL2P15408 326 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 NQO1P15559 274 aaKnown RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 EPB42P16452 691 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 PBLDP30039 288 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TRIM23P36406 574 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 PREPP48147 710 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 CCNG1P51959 295 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 IRX1P78414 480 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 ABRQ12979 859 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 KLF10Q13118 480 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 RPA4Q13156 261 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 C18orf21Q32NC0 220 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3GQ6DHY5 549 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3CQ6IPX1 549 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 PTCRAQ6ISU1 281 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 CHSY3Q70JA7 882 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 DDIASQ8IXT1 998 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 CFAP206Q8IYR0 622 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TBC1D3Q8IZP1 549 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 FBXL8Q96CD0 374 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 MRGPRX1Q96LB2 322 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 BTBD10Q9BSF8 475 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 SLC6A17Q9H1V8 727 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 DPEP2Q9H4A9 486 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 SLC32A1Q9H598 525 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 ZNF385DQ9H6B1 395 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 IPPKQ9H8X2 491 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 FAM8A1Q9UBU6 413 aa12.2□□□□□ -0.46
SHMT2-233ENST00000557529 TNRC18O15417 2968 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-233ENST00000557529 SHISA7A6NL88 538 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 OR7A17O14581 309 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 PIP5K1BO14986 540 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 UBDO15205 165 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 OR4F21O95013 312 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 PAK4O96013 591 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-233ENST00000557529 ARL1P40616 181 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-233ENST00000557529 SLC6A12P48065 614 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 FOXA1P55317 472 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 ERVPABLB-1P60509 514 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 FGL2Q14314 439 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 INPP5AQ14642 412 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 NAA25Q14CX7 972 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 HERC3Q15034 1050 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 IER5LQ5T953 404 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 DOK6Q6PKX4 331 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 CRTC3Q6UUV7 619 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 KIAA1324Q6UXG2 1013 aaKnown RBP12.19□□□□□ -0.46
SHMT2-233ENST00000557529 ZNF852Q6ZMS4 543 aa12.19□□□□□ -0.46
SHMT2-233ENST00000557529 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.467e-8■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms