RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 VITQ6UXI7 678 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CREB3L2Q70SY1 520 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 HAUS6Q7Z4H7 955 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 SFTPA2Q8IWL1 248 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 ELMOD1Q8N336 334 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CLIP4Q8N3C7 705 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 C11orf65Q8NCR3 313 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 SETD7Q8WTS6 366 aaKnown RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 DNASE1L2Q92874 299 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 NEUROG1Q92886 237 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 RILPL2Q969X0 211 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 RTP4Q96DX8 246 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 RRP36Q96EU6 259 aaKnown RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 APOLD1Q96LR9 279 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 GAD1Q99259 594 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 REEP2Q9BRK0 252 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 TMEM175Q9BSA9 504 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 SLC25A33Q9BSK2 321 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 TRIM6Q9C030 488 aaPredicted RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 NRBP2Q9NSY0 501 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 GTSE1Q9NYZ3 720 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 HCN3Q9P1Z3 774 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 CACNG4Q9UBN1 327 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 PCDHGB5Q9Y5G0 923 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 NEDD4P46934 1319 aa3.86□□□□□ -1.79
CHD8-212ENST00000557329 ATXN2Q99700 1313 aaKnown RBP3.86□□□□□ -1.79
CHD8-212ENST00000557329 GREB1Q4ZG55 1949 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 DOCK6Q96HP0 2047 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 ATG2BQ96BY7 2078 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 A0A0U1RQJ8 604 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 TARSL2A2RTX5 802 aaKnown RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 TYW5A2RUC4 315 aaKnown RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 FAM149AA5PLN7 773 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 C17orf100A8MU93 164 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 HEPACAM2A8MVW5 462 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 KDM4EB2RXH2 506 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 BTBD18B2RXH4 712 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 SPECC1L-ADORA2AF8WAN1 911 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 I6L893 689 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 ZNF197O14709 1029 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 IFIT3O14879 490 aaKnown RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 WNT9BO14905 357 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 CHMP2AO43633 222 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 SH3BP5O60239 455 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 NDUFB4O95168 129 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 C22orf31O95567 290 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 ACAA1P09110 424 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 U2AF2P26368 475 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD8-212ENST00000557329 C21orf33P30042 268 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 DCTDP32321 178 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 EIF2S3P41091 472 aaKnown RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 NOVP48745 357 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 SEMG2Q02383 582 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 GRSF1Q12849 480 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD8-212ENST00000557329 NFATC4Q14934 902 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 TAF5Q15542 800 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 PSMD5Q16401 504 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 MAPK6Q16659 721 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 ODF3L2Q3SX64 289 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 MCMDC2Q4G0Z9 681 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 INO80DQ53TQ3 878 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 SH2D4BQ5SQS7 431 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 TRIM74Q86UV6 250 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 TRIM73Q86UV7 250 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 TBC1D10CQ8IV04 446 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 CCDC60Q8IWA6 550 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 MAGEC3Q8TD91 643 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 TCEAL4Q96EI5 215 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 LRFN5Q96NI6 719 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 MXRA8Q9BRK3 442 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 TRIM4Q9C037 500 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 C8orf33Q9H7E9 229 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 MVB12BQ9H7P6 319 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 RIC8AQ9NPQ8 531 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 MARCH5Q9NX47 278 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 GDE1Q9NZC3 331 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 BCCIPQ9P287 314 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD8-212ENST00000557329 SUCLA2Q9P2R7 463 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 PLEKHB1Q9UF11 243 aaPredicted RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 MAD2L2Q9UI95 211 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 HES2Q9Y543 173 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 DSPP15924 2871 aaKnown RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 ASH1LQ9NR48 2969 aaKnown RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 COL1A2P08123 1366 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 MAST4O15021 2626 aa3.85□□□□□ -1.79
CHD8-212ENST00000557329 BAZ2BQ9UIF8 2168 aaKnown RBP3.85□□□□□ -1.79
CHD8-212ENST00000557329 UNC79Q9P2D8 2635 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 TRABD2BA6NFA1 517 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ARL5CA6NH57 179 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CASTOR2A6NHX0 329 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 MEIS2O14770 477 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 RRP8O43159 456 aaKnown RBP3.84□□□□□ -1.79
CHD8-212ENST00000557329 ADAM12O43184 909 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 KLK10O43240 276 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 ERLIN2O94905 339 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CALM1P0DP23 149 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CALM2P0DP24 149 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 CALM3P0DP25 149 aa3.84□□□□□ -1.79
CHD8-212ENST00000557329 IRF1P10914 325 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms