RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CDC16Q13042 620 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 AIMP2Q13155 320 aaKnown RBP12.13□□□□□ -0.47
PSEN1-221ENST00000557293 ZNF169Q14929 603 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-221ENST00000557293 SLC14A2Q15849 920 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 LDLRAP1Q5SW96 308 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 FNBP1LQ5T0N5 605 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 ZFYVE27Q5T4F4 411 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 B3GNTL1Q67FW5 361 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-221ENST00000557293 RPUSD3Q6P087 351 aaKnown RBP12.13□□□□□ -0.47
PSEN1-221ENST00000557293 BNC2Q6ZN30 1099 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-221ENST00000557293 ADGRF3Q8IZF5 1079 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 OR2L2Q8NH16 312 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 ZNF670Q9BS34 389 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 HAUS2Q9NVX0 235 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 IP6K2Q9UHH9 426 aa12.13□□□□□ -0.47
PSEN1-221ENST00000557293 LOC285095A0A1B0GVY8 99 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 CCDC66A2RUB6 948 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 SOCS6O14544 535 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 KLHL18O94889 574 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 POLBP06746 335 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 ITGAXP20702 1163 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 NDUFS1P28331 727 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 GCGRP47871 477 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 TAS2R40P59535 323 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 DCDP81605 110 aaKnown RBP12.12□□□□□ -0.47
PSEN1-221ENST00000557293 Q0VFX4 171 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 SLC9A5Q14940 896 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 ASIC2Q16515 512 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 PRAMEF13Q5VWM6 474 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 MRGPRGQ86SM5 289 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 DAAM2Q86T65 1068 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 PLD5Q8N7P1 536 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 KCTD6Q8NC69 237 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 LCN9Q8WX39 176 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 TRIM11Q96F44 468 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 CCDC120Q96HB5 630 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 TAAR6Q96RI8 345 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 TRIM56Q9BRZ2 755 aaKnown RBP12.12□□□□□ -0.47
PSEN1-221ENST00000557293 SLC7A5P2Q9GIP4 190 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 THAP2Q9H0W7 228 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 CBX8Q9HC52 389 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 IFT80Q9P2H3 777 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-221ENST00000557293 DHCR7Q9UBM7 475 aaKnown RBP12.12□□□□□ -0.47
PSEN1-221ENST00000557293 FBXL4Q9UKA2 621 aa12.12□□□□□ -0.47
PSEN1-221ENST00000557293 GSAPA4D1B5 854 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 MATN2O00339 956 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 BUD23O43709 281 aaKnown RBP12.11□□□□□ -0.47
PSEN1-221ENST00000557293 PRICKLE3O43900 615 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-221ENST00000557293 WISP2O76076 250 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 CYP1A2P05177 515 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 CD63P08962 238 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 SPAM1P38567 509 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 PRKAA1Q13131 559 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 PTPRCAPQ14761 206 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 PDK2Q15119 407 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 CYP2A13Q16696 494 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 NKAIN1Q4KMZ8 207 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 ZNF658BQ4V348 819 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-221ENST00000557293 KDELC1Q6UW63 502 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 KIRREL2Q6UWL6 708 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 FAM151BQ6UXP7 276 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 DET1Q7L5Y6 550 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 PHC3Q8NDX5 983 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 ACVR1CQ8NER5 493 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 COG1Q8WTW3 980 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 LINC00615Q96LM1 132 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-221ENST00000557293 RNF157Q96PX1 679 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 SRPK1Q96SB4 655 aaKnown RBP12.11□□□□□ -0.47
PSEN1-221ENST00000557293 C17orf62Q9BQA9 187 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 NUP62CLQ9H1M0 184 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 TFB2MQ9H5Q4 396 aaKnown RBP12.11□□□□□ -0.47
PSEN1-221ENST00000557293 GLOD4Q9HC38 313 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 CHST11Q9NPF2 352 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 OLAHQ9NV23 265 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 FAM8A1Q9UBU6 413 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-221ENST00000557293 ANAPC7Q9UJX3 599 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 AP1M2Q9Y6Q5 423 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 COLEC10Q9Y6Z7 277 aa12.11□□□□□ -0.47
PSEN1-221ENST00000557293 NUP210LQ5VU65 1888 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 GLYATL1P3A0A0U1RQE8 302 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 C19orf84I3L1E1 186 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 PMPCBO75439 489 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 OR2B3O76000 313 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 ONECUT2O95948 504 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 COX6B1P14854 86 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 MMP11P24347 488 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 CD68P34810 354 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-221ENST00000557293 CHRNA4P43681 627 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 KLHL30Q0D2K2 578 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 TLR1Q15399 786 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 CDSNQ15517 529 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 HADHQ16836 314 aaKnown RBP12.1□□□□□ -0.47
PSEN1-221ENST00000557293 DEFB110Q30KQ9 67 aa12.1□□□□□ -0.47
PSEN1-221ENST00000557293 BCL7AQ4VC05 210 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms