RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RAD51DO75771 328 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 CLDN9O95484 217 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ENDOUP21128 410 aaKnown RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 HSPA14Q0VDF9 509 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 NAA30Q147X3 362 aaPredicted RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 BPIFB1Q8TDL5 484 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 SSU72Q9NP77 194 aaKnown RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 PPP1R3GB7ZBB8 358 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 OAZ2O95190 189 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 SLC6A6P31641 620 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 RBMXP38159 391 aaKnown RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 HJURPQ8NCD3 748 aaPredicted RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 USP29Q9HBJ7 922 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 CAPN6Q9Y6Q1 641 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 CDK3Q00526 305 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ORC1Q13415 861 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 WDR53Q7Z5U6 358 aaPredicted RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 HAVCR2Q8TDQ0 301 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 FUZQ9BT04 418 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 TBC1D17Q9HA65 648 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ERVK-5Q9HDB9 667 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ETNK2Q9NVF9 386 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 SAGE1Q9NXZ1 904 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 MARCH2Q9P0N8 246 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 TEX13DA0A0J9YY54 714 aaPredicted RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ALDH2P05091 517 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 PLK1P53350 603 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ALG1LQ6GMV1 187 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 HHIPL2Q6UWX4 724 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 IL17REQ8NFR9 667 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 SLC22A17Q8WUG5 538 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 RDH12Q96NR8 316 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 YIPF4Q9BSR8 244 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 PLA2R1Q13018 1463 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM2Q9UHN6 1383 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ADH1CP00326 375 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 PCDH20Q8N6Y1 951 aaKnown RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 NAT16Q8N8M0 369 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 POLR2J2Q9GZM3 115 aaKnown RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 PLEKHA3Q9HB20 300 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 MCCC2Q9HCC0 563 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 KBTBD4Q9NVX7 518 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ELOVL2Q9NXB9 296 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 NUDT4Q9NZJ9 180 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 HYKKA2RU49 373 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 C5orf60A6NFR6 353 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 FBP2O00757 339 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 OIP5O43482 229 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 CSTF2P33240 577 aaKnown RBP eCLIP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 SEMA5AQ13591 1074 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 RAB35Q15286 201 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 PCK2Q16822 640 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ATAD1Q8NBU5 361 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 SERINC1Q9NRX5 453 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 COL15A1P39059 1388 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 UNC13CQ8NB66 2214 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 RARAP10276 462 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 TAF1CQ15572 869 aaPredicted RBP8.71□□□□□ -1.02
SYNE3-205ENST00000557275 UNC93AQ86WB7 457 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 FCAMRQ8WWV6 532 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 RIPOR3Q96MK2 946 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 TCF25Q9BQ70 676 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 ARMC1Q9NVT9 282 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 SIGLEC16A6NMB1 481 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 EFCAB7A8K855 629 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 HOXD8P13378 290 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 IFI35P80217 286 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 NFKB2Q00653 900 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 MRPL49Q13405 166 aaKnown RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 TLR1Q15399 786 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SSX2Q16385 188 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 MOB1BQ7L9L4 216 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 WNT8BQ93098 351 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 MKKSQ9NPJ1 570 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 IGSF9Q9P2J2 1179 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 GAKO14976 1311 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF878C9JN71 531 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SSTR1P30872 391 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PARP8Q8N3A8 854 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 GEMIN6Q8WXD5 167 aaKnown RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 OSTF1Q92882 214 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SNAPC3Q92966 411 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 AARSD1Q9BTE6 412 aaKnown RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 FOLH1BQ9HBA9 442 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 FETUBQ9UGM5 382 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CEMIPQ8WUJ3 1361 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SLC2A5P22732 501 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ATP5C1P36542 298 aaKnown RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ACTBP60709 375 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ACTG1P63261 375 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 BDH1Q02338 343 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CRHR2Q13324 411 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 RAET1GQ6H3X3 334 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 VANGL1Q8TAA9 524 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PUS3Q9BZE2 481 aaKnown RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CRTAC1Q9NQ79 661 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 NARFQ9UHQ1 456 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 DFNA5O60443 496 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ETV6P41212 452 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PCDH1Q08174 1060 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms