RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CPT1CQ8TCG5 803 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.46□□□□□ -1.06
VRK1-206ENST00000557222 CTNNBL1Q8WYA6 563 aaPredicted RBP8.46□□□□□ -1.06
VRK1-206ENST00000557222 RAPGEF5Q92565 580 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 ELMO2Q96JJ3 720 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 SLC25A23Q9BV35 468 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TUBB2BQ9BVA1 445 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 MAK16Q9BXY0 300 aaKnown RBP8.46□□□□□ -1.06
VRK1-206ENST00000557222 CEP41Q9BYV8 373 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 GLOD4Q9HC38 313 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 SYTL2Q9HCH5 934 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 ZFP64Q9NPA5 681 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 FGF21Q9NSA1 209 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 KCND1Q9NSA2 647 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 TMPRSS11EQ9UL52 423 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 WDR37Q9Y2I8 494 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 HEY1Q9Y5J3 304 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 LRBAP50851 2863 aa8.46□□□□□ -1.06
VRK1-206ENST00000557222 POLEQ07864 2286 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 A0A0A6YYK5 440 aaPredicted RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 OR5K3A6NET4 321 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 C3orf70A6NLC5 250 aaPredicted RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 DPM1O60762 260 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 MTX2O75431 263 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 POP7O75817 140 aaKnown RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 SORBS2O94875 1100 aaKnown RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 AGFG2O95081 481 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 TIAF1O95411 115 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 ZBTB11O95625 1053 aaPredicted RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 KLK3P07288 261 aaPredicted RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 PIRTP0C851 137 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 FSTP19883 344 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 NR1D1P20393 614 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 GJC1P36383 396 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 DRG2P55039 364 aaKnown RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 FANCCQ00597 558 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 ITGA9Q13797 1035 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 CHRNA6Q15825 494 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 SEPT7Q16181 437 aaKnown RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 RPE65Q16518 533 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 SLC18A3Q16572 532 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 KHDC1Q4VXA5 237 aaKnown RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 METRNLQ641Q3 311 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 VN1R5Q7Z5H4 357 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 TMEM135Q86UB9 458 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 ARMC10Q8N2F6 343 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 DDHD1Q8NEL9 900 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 GDAP1Q8TB36 358 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 SSC4DQ8WTU2 575 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 TEKT5Q96M29 485 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 AGAP3Q96P47 875 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 BHLHE41Q9C0J9 482 aaPredicted RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 ING2Q9H160 280 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 IL26Q9NPH9 171 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 ACSS2Q9NR19 701 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 SMOXQ9NWM0 555 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 IL17CQ9P0M4 197 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 PLEKHB1Q9UF11 243 aaPredicted RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 FAM153AQ9UHL3 310 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 ACSL5Q9ULC5 683 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 G3BP2Q9UN86 482 aaKnown RBP8.45□□□□□ -1.06
VRK1-206ENST00000557222 BTRCQ9Y297 605 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 SHANK1Q9Y566 2161 aa8.45□□□□□ -1.06
VRK1-206ENST00000557222 ABCA12Q86UK0 2595 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 SPTBP11277 2137 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 UBA6A0AVT1 1052 aaPredicted RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 LRRD1A4D1F6 860 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 MGAT4DA6NG13 374 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 MATN2O00339 956 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 KLHL41O60662 606 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 MT-CYBP00156 380 aaPredicted RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 TMEM253P0C7T8 217 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 MTHFD1P11586 935 aaKnown RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 GNLYP22749 145 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 NDUFS1P28331 727 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 SPAM1P38567 509 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 SLC1A1P43005 524 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 TNNT3P45378 269 aaPredicted RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 UBASH3AP57075 661 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 PLCL1Q15111 1095 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 PRKD1Q15139 912 aaPredicted RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 LONRF2Q1L5Z9 754 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 DNTTIP2Q5QJE6 756 aaKnown RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 TMEM220Q6QAJ8 160 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 MED25Q71SY5 747 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 OOSP2Q86WS3 158 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 TTC30BQ8N4P2 665 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 GLIS1Q8NBF1 620 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 OR2L2Q8NH16 312 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 ADAMTS17Q8TE56 1095 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 CPT1BQ92523 772 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 ZNF501Q96CX3 271 aaPredicted RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 LINC00615Q96LM1 132 aaPredicted RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 VAT1Q99536 393 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 MAP3K3Q99759 626 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 C19orf43Q9BQ61 176 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 DPH2Q9BQC3 489 aaPredicted RBP8.44□□□□□ -1.06
VRK1-206ENST00000557222 ANP32EQ9BTT0 268 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 NLNQ9BYT8 704 aa8.44□□□□□ -1.06
VRK1-206ENST00000557222 TRIM55Q9BYV6 548 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms