RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SSPNQ14714 243 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 PTPRCAPQ14761 206 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 NAA30Q147X3 362 aaPredicted RBP8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 ZRSR2Q15696 482 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 ANO6Q4KMQ2 910 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 TEX44Q53QW1 395 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 SIRPB2Q5JXA9 342 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 C1orf189Q5VU69 101 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 MLIPQ5VWP3 458 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 SLC9A4Q6AI14 798 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 ALKBH5Q6P6C2 394 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 CDHR3Q6ZTQ4 885 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 GLT6D1Q7Z4J2 308 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 DAAM2Q86T65 1068 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 CFAP206Q8IYR0 622 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 ACVR1CQ8NER5 493 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 OR2L2Q8NH16 312 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 BLOC1S5Q8TDH9 187 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 TEKT5Q96M29 485 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 IP6K3Q96PC2 410 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 TRAPPC9Q96Q05 1148 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 MAK16Q9BXY0 300 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 PITPNM3Q9BZ71 974 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 DEF6Q9H4E7 631 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 SMOXQ9NWM0 555 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.75□□□□□ -1.011e-9■■■□□ 15.2
HNRNPC-227ENST00000556897 OSGIN2Q9Y236 505 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 PKP3Q9Y446 797 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 CSAG2Q9Y5P2 127 aa8.75□□□□□ -1.01
HNRNPC-227ENST00000556897 ANKRD12Q6UB98 2062 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 PKDREJQ9NTG1 2253 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 C3orf70A6NLC5 250 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 OR2B3O76000 313 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 EPOP01588 193 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 SERPING1P05155 500 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 HBQ1P09105 142 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 NDUFS1P28331 727 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 CD68P34810 354 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 PER3P56645 1201 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 DYNLT1P63172 113 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 TYRO3Q06418 890 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 SLC9A5Q14940 896 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 HIF1AQ16665 826 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 FIGNQ5HY92 759 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 SP5Q6BEB4 398 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 KDELC1Q6UW63 502 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 PPP1R32Q7Z5V6 425 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 KCNMB4Q86W47 210 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 TMEM151BQ8IW70 566 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 MCEMP1Q8IX19 187 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 GPR135Q8IZ08 494 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 OR2Y1Q8NGV0 311 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 ZNF398Q8TD17 642 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 GRHL3Q8TE85 626 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 SYN2Q92777 582 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 MRGPRX2Q96LB1 330 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 C17orf62Q9BQA9 187 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 NAT10Q9H0A0 1025 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 FAM60AQ9NP50 221 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 IGSF5Q9NSI5 407 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 HACD3Q9P035 362 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 UVRAGQ9P2Y5 699 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 SAE1Q9UBE0 346 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 FAM153AQ9UHL3 310 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 GPN3Q9UHW5 284 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 NOVA2Q9UNW9 492 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 ZFHX3Q15911 3703 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 ADGRG4Q8IZF6 3080 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 MYO7BQ6PIF6 2116 aa8.74□□□□□ -1.01
HNRNPC-227ENST00000556897 DOCK10Q96BY6 2186 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 CCDC66A2RUB6 948 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 KLHL33A6NCF5 533 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 C2orf74A8MZ97 194 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 ZNF487B1APH4 448 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 PRSS44E7EML9 344 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 E2F3O00716 465 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 STX7O15400 261 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 HCRTR1O43613 425 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 SGTAO43765 313 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 KLHL41O60662 606 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 CNOT3O75175 753 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 KRT38O76015 456 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 IGHEP01854 428 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 UMODP07911 640 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 NFKB1P19838 968 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 ITGA3P26006 1051 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 TNNT3P45378 269 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 SOX8P57073 446 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 DCDP81605 110 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 WASHC5Q12768 1159 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 MESDQ14696 234 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 NR1I3Q14994 352 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 PRKD1Q15139 912 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 SLC1A5Q15758 541 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 CYP2A13Q16696 494 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 DEFB110Q30KQ9 67 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 BCL7AQ4VC05 210 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 RFX6Q8HWS3 928 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 PHC3Q8NDX5 983 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms