RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 DENND6AQ8IWF6 608 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
SRP54-210ENST00000556380 KIF18AQ8NI77 898 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 ZFPM2Q8WW38 1151 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 ATXN7L3BQ96GX2 97 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 PRR11Q96HE9 360 aaPredicted RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 LRRC1Q9BTT6 524 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 NRSN2Q9GZP1 204 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 DPH5Q9H2P9 285 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 SEMA6CQ9H3T2 930 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 EPB41L1Q9H4G0 881 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 RDH14Q9HBH5 336 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 C20orf96Q9NUD7 363 aaPredicted RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 FAM8A1Q9UBU6 413 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 MED16Q9Y2X0 877 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 CFAP20Q9Y6A4 193 aaKnown RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 CELSR3Q9NYQ7 3312 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 IGHV5-10-1A0A0J9YXX1 117 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 PMS2P1A4D2B8 440 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 TMX2-CTNND1H3BSU7 103 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 NDC80O14777 642 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 ZW10O43264 779 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 SLCO2B1O94956 709 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 ESR1P03372 595 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 F7P08709 466 aaPredicted RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 SLC35G4P0C7Q5 338 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 ERVK-10P10266 1014 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 GABRB3P28472 473 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 FMO4P31512 558 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 GMPRP36959 345 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 LSSP48449 732 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 LIMK2P53671 638 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 INHBCP55103 352 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 SLC7A5Q01650 507 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 CTBP1Q13363 440 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 BOP1Q14137 746 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 GBX1Q14549 363 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 FASTKD3Q14CZ7 662 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 TEDDM1Q5T9Z0 273 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 ZNF470Q6ECI4 717 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 DUS1LQ6P1R4 473 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 TMEM71Q6P5X7 295 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 TRMT10BQ6PF06 316 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 UNQ6494/PRO21346Q6UXR6 183 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 PDZD3Q86UT5 571 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 PIM3Q86V86 326 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 VRK3Q8IV63 474 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 CNTN4Q8IWV2 1026 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 TRIM48Q8IWZ4 208 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 LMNTD2Q8IXW0 634 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 SLC22A15Q8IZD6 547 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 KRT222Q8N1A0 295 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 KDF1Q8NAX2 398 aaPredicted RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 C2CD4AQ8NCU7 369 aaPredicted RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 OR4D9Q8NGE8 314 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 OR10G6Q8NH81 332 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 ELMO1Q92556 727 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 CXorf40BQ96DE9 158 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 LIN37Q96GY3 246 aaPredicted RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 C12orf66Q96MD2 445 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 DPYSL5Q9BPU6 564 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 RAB17Q9H0T7 212 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 STN1Q9H668 368 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 LATS2Q9NRM7 1088 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 IMP3Q9NV31 184 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 INTS10Q9NVR2 710 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 MOCS1Q9NZB8 636 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 TMEM9Q9P0T7 183 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 GALPQ9UBC7 116 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 DKK4Q9UBT3 224 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 EPHA6Q9UF33 1036 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 ZC3H7BQ9UGR2 993 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 GNPTGQ9UJJ9 305 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 FBXO5Q9UKT4 447 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 CRYL1Q9Y2S2 319 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 UTP11Q9Y3A2 253 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 URB1O60287 2271 aaKnown RBP9.41□□□□□ -0.9
SRP54-210ENST00000556380 ITPR1Q14643 2758 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 KIF26BQ2KJY2 2108 aa9.41□□□□□ -0.9
SRP54-210ENST00000556380 ZFHX4Q86UP3 3567 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 KMT2BQ9UMN6 2715 aaPredicted RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 F8W8V4 182 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 H3BMM5 538 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 TAF4O00268 1085 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 EIF3HO15372 352 aaKnown RBP eCLIP9.4□□□□□ -0.9
SRP54-210ENST00000556380 DUX1O43812 170 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 UBXN7O94888 489 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 HAUS5O94927 633 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 C9P02748 559 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 PROS1P07225 676 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 THRAP10827 490 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 PKMP14618 531 aaKnown RBP9.4□□□□□ -0.9
SRP54-210ENST00000556380 TYRP1P17643 537 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 ITGB6P18564 788 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 NDUFS1P28331 727 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 SLC1A2P43004 574 aa9.4□□□□□ -0.9
SRP54-210ENST00000556380 LEPRP48357 1165 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms