RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 VRK3Q8IV63 474 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
ABCD4-223ENST00000555904 ARL10Q8N8L6 244 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-223ENST00000555904 OR4C6Q8NH72 309 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 CFAP61Q8NHU2 1237 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 TFGQ92734 400 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-223ENST00000555904 PDLIM5Q96HC4 596 aaKnown RBP12.23□□□□□ -0.45
ABCD4-223ENST00000555904 RMDN2Q96LZ7 410 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 SMC6Q96SB8 1091 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 TRIM54Q9BYV2 358 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 DERL2Q9GZP9 239 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 TRIT1Q9H3H1 467 aaKnown RBP12.23□□□□□ -0.45
ABCD4-223ENST00000555904 NMRAL1Q9HBL8 299 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 PARD6AQ9NPB6 346 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 POT1Q9NUX5 634 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-223ENST00000555904 PCDH15Q96QU1 1955 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 LRP4O75096 1905 aa12.23□□□□□ -0.45
ABCD4-223ENST00000555904 A6NCN8 305 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 OR52A4PA6NMU1 304 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 GOLGA8RI6L899 631 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 ZBTB14O43829 449 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 RFPL1O75677 317 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 VIPP01282 170 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 PYGBP11216 843 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 KRT4P19013 534 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 CYP2A7P20853 494 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 MAGEA12P43365 314 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 CCT5P48643 541 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 PGGT1BP53609 377 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 GPS2Q13227 327 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 CSHL1Q14406 222 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 RPE65Q16518 533 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 PPM1JQ5JR12 505 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 CAPRIN2Q6IMN6 1127 aaKnown RBP12.22□□□□□ -0.45
ABCD4-223ENST00000555904 IYDQ6PHW0 289 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 ASCL5Q7RTU5 278 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 ADAMTSL2Q86TH1 951 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 DCUN1D3Q8IWE4 304 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 CYP4X1Q8N118 509 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 RAB42Q8N4Z0 105 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 EID2Q8N6I1 236 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 SLC37A2Q8TED4 501 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 SETD7Q8WTS6 366 aaKnown RBP12.22□□□□□ -0.45
ABCD4-223ENST00000555904 FERD3LQ96RJ6 166 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 MVB12BQ9H7P6 319 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 CAAP1Q9H8G2 361 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 POLG2Q9UHN1 485 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 WDR37Q9Y2I8 494 aa12.22□□□□□ -0.45
ABCD4-223ENST00000555904 CFAP20Q9Y6A4 193 aaKnown RBP12.22□□□□□ -0.45
ABCD4-223ENST00000555904 VPS13AQ96RL7 3174 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 CCDC189A1A4V9 331 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 COPEO14579 308 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 SLC16A5O15375 505 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 ZW10O43264 779 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 GFRA3O60609 400 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 GLRA3O75311 464 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 KLHL2O95198 593 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 MATN4O95460 622 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 EML2O95834 649 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 TSPAN12O95859 305 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 GSTA1P08263 222 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 ENO2P09104 434 aaPredicted RBP12.21□□□□□ -0.45
ABCD4-223ENST00000555904 HIST1H2AGP0C0S8 130 aaPredicted RBP12.21□□□□□ -0.45
ABCD4-223ENST00000555904 BRAFP15056 766 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 XRCC1P18887 633 aaPredicted RBP12.21□□□□□ -0.45
ABCD4-223ENST00000555904 HIST1H2ADP20671 130 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 ACADLP28330 430 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 IRF9Q00978 393 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 HHEXQ03014 270 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 CLCA4Q14CN2 919 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 PLCL1Q15111 1095 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 NR0B2Q15466 257 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 C14orf28Q4W4Y0 310 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 HSP90B2PQ58FF3 399 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 TMEM207Q6UWW9 146 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 UBE2R2Q712K3 238 aaPredicted RBP12.21□□□□□ -0.45
ABCD4-223ENST00000555904 KANSL1Q7Z3B3 1105 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 TRABD2AQ86V40 505 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 RBM12BQ8IXT5 1001 aaKnown RBP12.21□□□□□ -0.45
ABCD4-223ENST00000555904 TBC1D21Q8IYX1 336 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 NAGSQ8N159 534 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 SFRP1Q8N474 314 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 SPATA6LQ8N4H0 392 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 KYQ8NBH2 561 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 OR6C4Q8NGE1 309 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 OR5K2Q8NHB8 316 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 MCOLN3Q8TDD5 553 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 MZB1Q8WU39 189 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 KCTD4Q8WVF5 259 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 ANKRD49Q8WVL7 239 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 SH3KBP1Q96B97 665 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 ALKBH8Q96BT7 664 aaKnown RBP12.21□□□□□ -0.45
ABCD4-223ENST00000555904 ZBTB9Q96C00 473 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 SCYL1Q96KG9 808 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 HIST1H2AHQ96KK5 128 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 UBXN10Q96LJ8 280 aa12.21□□□□□ -0.45
ABCD4-223ENST00000555904 INSM2Q96T92 566 aaPredicted RBP12.21□□□□□ -0.45
ABCD4-223ENST00000555904 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms