RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PIWIL2Q8TC59 973 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 WFIKKN2Q8TEU8 576 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 KCTD4Q8WVF5 259 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 C10orf82Q8WW14 230 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ING5Q8WYH8 240 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 FGF13Q92913 245 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 NXNL1Q96CM4 212 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 LMLNQ96KR4 655 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 NSMCE3Q96MG7 304 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF641Q96N77 438 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 NDNQ99608 321 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 KXD1Q9BQD3 176 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 TUBB6Q9BUF5 446 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 TMEM120AQ9BXJ8 343 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CPEB1Q9BZB8 566 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 TM6SF2Q9BZW4 377 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 WWP1Q9H0M0 922 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 LINC00597Q9H2U6 94 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 MRPL46Q9H2W6 279 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SUDS3Q9H7L9 328 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 LMAN1LQ9HAT1 526 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SYTL2Q9HCH5 934 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 OXSMQ9NWU1 459 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 THG1LQ9NWX6 298 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 DUS2Q9NX74 493 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 MARCH4Q9P2E8 410 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 HECAQ9UBI9 543 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 INTS6Q9UL03 887 aaKnown RBP6.74□□□□□ -1.33
SLIRP-204ENST00000555890 CRYL1Q9Y2S2 319 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF711Q9Y462 761 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 WNT6Q9Y6F9 365 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 COMMD10Q9Y6G5 202 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 SLC30A1Q9Y6M5 507 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 PLXNB3Q9ULL4 1909 aa6.74□□□□□ -1.33
SLIRP-204ENST00000555890 A0A0J9YYE9 177 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 UBA6A0AVT1 1052 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 PRAMEF27A3QJZ7 478 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 G3V2L1 256 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 H0YHG0 523 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 MYO1CO00159 1063 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 AURKAO14965 403 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 HTRA2O43464 458 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CCDC22O60826 627 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 VPS26AO75436 327 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 SRP72O76094 671 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 UBOX5O94941 541 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 FSBPO95073 299 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 NFATC1O95644 943 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 HSPA4LO95757 839 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 TRBC1P01850 177 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 IGHA1P01876 353 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 SLC4A1P02730 911 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ASLP04424 464 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 DLDP09622 509 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CCDC166P0CW27 439 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ADH5P11766 374 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 DRD2P14416 443 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CTPS1P17812 591 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 FDXRP22570 491 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ATP5F1P24539 256 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 HMGCLP35914 325 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 SERPINB5P36952 375 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 PTGER3P43115 390 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CXCL12P48061 93 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 GLRBP48167 497 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 RASSF2P50749 326 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 HK2P52789 917 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ST8SIA6P61647 398 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 PFKPQ01813 784 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CACNG1Q06432 222 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 MAP7Q14244 749 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CSHL1Q14406 222 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ACAP2Q15057 778 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 DHCR24Q15392 516 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 TYSND1Q2T9J0 566 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ZRANB3Q5FWF4 1079 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ZNF789Q5FWF6 425 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CFAP157Q5JU67 520 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 RBM20Q5T481 1227 aaKnown RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 LYPLAL1Q5VWZ2 237 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 LIPMQ5VYY2 423 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 GRAMD4Q6IC98 578 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 UGT3A1Q6NUS8 523 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 C22orf39Q6P5X5 142 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CERS6Q6ZMG9 384 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 ZCCHC23Q6ZST2 131 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 TAS2R42Q7RTR8 314 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 LDB1Q86U70 411 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 SLC22A9Q8IVM8 553 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 MFSD6LQ8IWD5 586 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CENPLQ8N0S6 344 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 STK40Q8N2I9 435 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 CBARPQ8N350 705 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 FSTL5Q8N475 847 aaPredicted RBP6.73□□□□□ -1.33
SLIRP-204ENST00000555890 AFAP1L2Q8N4X5 818 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 FITM2Q8N6M3 262 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 OR6K2Q8NGY2 324 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 RFWD2Q8NHY2 731 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 HEXDCQ8WVB3 486 aa6.73□□□□□ -1.33
SLIRP-204ENST00000555890 OSCP1Q8WVF1 389 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms