RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CLEC14AQ86T13 490 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 GPSM1Q86YR5 675 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 DCUN1D3Q8IWE4 304 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 CENPLQ8N0S6 344 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-220ENST00000555634 ACVR1CQ8NER5 493 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 CFAP61Q8NHU2 1237 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 TCP10LQ8TDR4 215 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 NAT14Q8WUY8 206 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 ATL1Q8WXF7 558 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 KIAA1191Q96A73 305 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 NXNL1Q96CM4 212 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 UBXN10Q96LJ8 280 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 C12orf66Q96MD2 445 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 FAM111AQ96PZ2 611 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 WWP1Q9H0M0 922 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 C11orf16Q9NQ32 467 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 INTS9Q9NV88 658 aaKnown RBP10.96□□□□□ -0.65
SHMT2-220ENST00000555634 ARL15Q9NXU5 204 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 CD274Q9NZQ7 290 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 CPSF2Q9P2I0 782 aaKnown RBP10.96□□□□□ -0.65
SHMT2-220ENST00000555634 POLG2Q9UHN1 485 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 SLC6A14Q9UN76 642 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 HCN4Q9Y3Q4 1203 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 CACNA1EQ15878 2313 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 KIR2DS5A0A0G2JLQ3 304 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 A0A0G2JNG1 304 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 KIR2DS3K7RE56 304 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 GIPC1O14908 333 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 KHNYNO15037 678 aaKnown RBP10.95□□□□□ -0.66
SHMT2-220ENST00000555634 ZW10O43264 779 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 AQP9O43315 295 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 GPC4O75487 556 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 ANXA5P08758 320 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 F3P13726 295 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 RPA3P35244 121 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-220ENST00000555634 HNMTP50135 292 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 GRIK2Q13002 908 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 EIF2B5Q13144 721 aaKnown RBP10.95□□□□□ -0.66
SHMT2-220ENST00000555634 GBX1Q14549 363 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 KIR2DS5Q14953 304 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 TSNQ15631 228 aaKnown RBP10.95□□□□□ -0.66
SHMT2-220ENST00000555634 LPAL2Q16609 132 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 UAP1L1Q3KQV9 507 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 TECRLQ5HYJ1 363 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 WASH2PQ6VEQ5 465 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 C11orf96Q7Z7L8 435 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 ZNF548Q8NEK5 533 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-220ENST00000555634 C1orf216Q8TAB5 229 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 MGARPQ8TDB4 240 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 GPBAR1Q8TDU6 330 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 LMX1AQ8TE12 382 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 TFGQ92734 400 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-220ENST00000555634 ELF4Q99607 663 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-220ENST00000555634 LRFN3Q9BTN0 628 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 LRRC61Q9BV99 259 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 TMEM168Q9H0V1 697 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 MVB12BQ9H7P6 319 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 PARVBQ9HBI1 364 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 WASH6PQ9NQA3 447 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 IGSF5Q9NSI5 407 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 IMP3Q9NV31 184 aaKnown RBP10.95□□□□□ -0.66
SHMT2-220ENST00000555634 NCKIPSDQ9NZQ3 722 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 NCDNQ9UBB6 729 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 PSMD13Q9UNM6 376 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 MED16Q9Y2X0 877 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 PLLPQ9Y342 182 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 OARD1Q9Y530 152 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 R4GN57 208 aa10.95□□□□□ -0.66
SHMT2-220ENST00000555634 PCDH15Q96QU1 1955 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 FOXO6A8MYZ6 492 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 B4DGG1 531 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 H3BQF6 201 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 TK2O00142 265 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 SCAMP1O15126 338 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 TYROBPO43914 113 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 FOXD2O60548 495 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-220ENST00000555634 PLIN3O60664 434 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 IPO13O94829 963 aaKnown RBP10.94□□□□□ -0.66
SHMT2-220ENST00000555634 WNT1P04628 370 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 MTHFD1P11586 935 aaKnown RBP10.94□□□□□ -0.66
SHMT2-220ENST00000555634 CPA3P15088 417 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 RPL10P27635 214 aaKnown RBP10.94□□□□□ -0.66
SHMT2-220ENST00000555634 HSD17B2P37059 387 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 CTSKP43235 329 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 PIK3CGP48736 1102 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 PPM1FP49593 454 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-220ENST00000555634 CSRP3P50461 194 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 IRX4P78413 519 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 CDKL1Q00532 357 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 PLCL1Q15111 1095 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 TCEA2Q15560 299 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 TUBB8Q3ZCM7 444 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 ZNF542PQ5EBM4 170 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 CFAP157Q5JU67 520 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 CDKL4Q5MAI5 379 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 SLC23A3Q6PIS1 610 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 NAPRTQ6XQN6 538 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 SLC9B2Q86UD5 537 aa10.94□□□□□ -0.66
SHMT2-220ENST00000555634 RBM12BQ8IXT5 1001 aaKnown RBP10.94□□□□□ -0.66
SHMT2-220ENST00000555634 TBC1D21Q8IYX1 336 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms