RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 OR2T11Q8NH01 316 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 TBC1D16Q8TBP0 767 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 SGK494Q96LW2 274 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 CMTM3Q96MX0 182 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 PSMD1Q99460 953 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 ABHD6Q9BV23 337 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 C1QTNF1Q9BXJ1 281 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 SH2D4AQ9H788 454 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 DNAJC18Q9H819 358 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 HHATLQ9HCP6 504 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 NPAP1Q9NZP6 1156 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 PNMA2Q9UL42 364 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 CORO1CQ9ULV4 474 aaPredicted RBP3.04□□□□□ -1.92
SNX6-204ENST00000555541 TP53TG3Q9ULZ0 132 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 SPIN1Q9Y657 262 aaPredicted RBP3.04□□□□□ -1.92
SNX6-204ENST00000555541 SESN1Q9Y6P5 492 aa3.04□□□□□ -1.92
SNX6-204ENST00000555541 TDRD9Q8NDG6 1382 aaKnown RBP3.03□□□□□ -1.92
SNX6-204ENST00000555541 SOS1Q07889 1333 aaPredicted RBP3.03□□□□□ -1.92
SNX6-204ENST00000555541 IGLV7-46A0A075B6I9 117 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 A0A1W2PR77 199 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 ELOVL7A1L3X0 281 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 FRMD3A2A2Y4 597 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 B4E171 279 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 NPHP1O15259 732 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 OR2C1O95371 312 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 ACADSP16219 412 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 GABRB1P18505 474 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 PON1P27169 355 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 TSPAN7P41732 249 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 RRS1Q15050 365 aaKnown RBP3.03□□□□□ -1.92
SNX6-204ENST00000555541 DCAF10Q5QP82 559 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 CYP4A22Q5TCH4 519 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 PSRC1Q6PGN9 363 aaPredicted RBP3.03□□□□□ -1.92
SNX6-204ENST00000555541 TRIM65Q6PJ69 517 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 LINGO4Q6UY18 593 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 MMS22LQ6ZRQ5 1243 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 SCYL3Q8IZE3 742 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 TMEM178AQ8NBL3 297 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 OR1J1Q8NGS3 322 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 HPSE2Q8WWQ2 592 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 AGAP3Q96P47 875 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 KAT14Q9H8E8 782 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 ACKR4Q9NPB9 350 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 INTS9Q9NV88 658 aaKnown RBP3.03□□□□□ -1.92
SNX6-204ENST00000555541 IRAK4Q9NWZ3 460 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 AMACRQ9UHK6 382 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 LYVE1Q9Y5Y7 322 aa3.03□□□□□ -1.92
SNX6-204ENST00000555541 PRSS51A0A1B0GVH4 220 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 A0A1W2PRB8 838 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 KHDRBS3O75525 346 aaKnown RBP3.02□□□□□ -1.93
SNX6-204ENST00000555541 CDC123O75794 336 aaPredicted RBP3.02□□□□□ -1.93
SNX6-204ENST00000555541 TPPPO94811 219 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 PIGNO95427 931 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 EFNA1P20827 205 aaPredicted RBP3.02□□□□□ -1.93
SNX6-204ENST00000555541 CHMP24386 653 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 PPARGP37231 505 aaPredicted RBP3.02□□□□□ -1.93
SNX6-204ENST00000555541 SNRPEP62304 92 aaKnown RBP3.02□□□□□ -1.93
SNX6-204ENST00000555541 CDR2Q01850 454 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 PNRC1Q12796 327 aaPredicted RBP3.02□□□□□ -1.93
SNX6-204ENST00000555541 PLA2G7Q13093 441 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 ALFQ53S48 1182 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 ZNF343Q6P1L6 599 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 TMEM154Q6P9G4 183 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 TEX11Q8IYF3 940 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 ZFAND2BQ8WV99 257 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 PGAM5Q96HS1 289 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 SYT15Q9BQS2 421 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 UNC45AQ9H3U1 944 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 RNF186Q9NXI6 227 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 ORC3Q9UBD5 711 aaPredicted RBP3.02□□□□□ -1.93
SNX6-204ENST00000555541 FBXL17Q9UF56 701 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.02□□□□□ -1.93
SNX6-204ENST00000555541 PCDHGA5Q9Y5G8 931 aa3.02□□□□□ -1.93
SNX6-204ENST00000555541 ASTN2O75129 1339 aaPredicted RBP3.01□□□□□ -1.93
SNX6-204ENST00000555541 A0A1W2PN81 502 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 MYO1GB0I1T2 1018 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 E9PI62 339 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 TO15178 435 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 DUS4LO95620 317 aaKnown RBP3.01□□□□□ -1.93
SNX6-204ENST00000555541 CHRNA7P36544 502 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 MAGEA11P43364 429 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 MPP1Q00013 466 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 HNRNPDQ14103 355 aaKnown RBP3.01□□□□□ -1.93
SNX6-204ENST00000555541 CRYMQ14894 314 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 GRTP1Q5TC63 336 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 SNX30Q5VWJ9 437 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 PIGZQ86VD9 579 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 MCEMP1Q8IX19 187 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 Q8N377 158 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 OMA1Q96E52 524 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 NSL1Q96IY1 281 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 MAGED4Q96JG8 741 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 FAM81BQ96LP2 452 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 TRAF4Q9BUZ4 470 aaPredicted RBP3.01□□□□□ -1.93
SNX6-204ENST00000555541 ITPAQ9BY32 194 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 P2RY12Q9H244 342 aa3.01□□□□□ -1.93
SNX6-204ENST00000555541 EXO1Q9UQ84 846 aaKnown RBP3.01□□□□□ -1.93
SNX6-204ENST00000555541 LOC101059948A0A1B0GTJ6 334 aa3□□□□□ -1.93
SNX6-204ENST00000555541 MEX3AA1L020 520 aaKnown RBP3□□□□□ -1.93
SNX6-204ENST00000555541 CDRT15L2A8MXV6 281 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms