RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 COL5A1P20908 1838 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 RHPN2P1A8MT19 583 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 IFRD1O00458 451 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 SGTAO43765 313 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 SHOX2O60902 331 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 TRIM16O95361 564 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 TOP3BO95985 862 aaKnown RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 C2P06681 752 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 DHRS4L1P0CG22 281 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CDK4P11802 303 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 FMO4P31512 558 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CRHR1P34998 444 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 ID4P47928 161 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CD151P48509 253 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 TAS2R39P59534 338 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 SIM1P81133 766 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 RPA4Q13156 261 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 ILKQ13418 452 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 NFE2L1Q14494 772 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 ZKSCAN8Q15776 578 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 TTC19Q6DKK2 380 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 TMEM207Q6UWW9 146 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 WASH2PQ6VEQ5 465 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 TAOK1Q7L7X3 1001 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 OTOAQ7RTW8 1153 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CMC1Q7Z7K0 106 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 GLRX5Q86SX6 157 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CLEC14AQ86T13 490 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 SLC9B2Q86UD5 537 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 SLC35F3Q8IY50 421 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CFAP206Q8IYR0 622 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 SFRP1Q8N474 314 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 TCP10LQ8TDR4 215 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 ACMSDQ8TDX5 336 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 NAT14Q8WUY8 206 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 ASZ1Q8WWH4 475 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CXorf40BQ96DE9 158 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 ATXN7L3BQ96GX2 97 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 BIRC8Q96P09 236 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 OLFM1Q99784 485 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 P2RY12Q9H244 342 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 COG4Q9H9E3 785 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 KCNK9Q9NPC2 374 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 WASH6PQ9NQA3 447 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 PRDM8Q9NQV8 689 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 SNX15Q9NRS6 342 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 ZNF358Q9NW07 568 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 MKS1Q9NXB0 559 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 SLC17A7Q9P2U7 560 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 GALPQ9UBC7 116 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 EMCNQ9ULC0 261 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CORO1CQ9ULV4 474 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 PADI4Q9UM07 663 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 APOBEC2Q9Y235 224 aaKnown RBP10.68□□□□□ -0.7
SHMT2-218ENST00000555213 CRYL1Q9Y2S2 319 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 PRSS21Q9Y6M0 314 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 DCHS1Q96JQ0 3298 aa10.68□□□□□ -0.7
SHMT2-218ENST00000555213 PLXNB3Q9ULL4 1909 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 FAM95CA0A1B0GW59 222 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 CPED1A4D0V7 1026 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 TM4SF5O14894 197 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 NUDT21O43809 227 aaKnown RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 NOBOXO60393 691 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 VPS26AO75436 327 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 RFPL3O75679 317 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 KCNK5O95279 499 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 GP1BAP07359 652 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 PKMP14618 531 aaKnown RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 CHRM3P20309 590 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 ACP1P24666 158 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 RPL10P27635 214 aaKnown RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 CDKN2DP55273 166 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 DLG1Q12959 904 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 TTLL9Q3SXZ7 439 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 CCDC157Q569K6 752 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 HECTD2Q5U5R9 776 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 METRNLQ641Q3 311 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 IYDQ6PHW0 289 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 OGFOD3Q6PK18 319 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 FAM83HQ6ZRV2 1179 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 EFL1Q7Z2Z2 1120 aaKnown RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 ARFGAP2Q8N6H7 521 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 GPR156Q8NFN8 814 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 KCNJ9Q92806 393 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 SH3KBP1Q96B97 665 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 ALKBH8Q96BT7 664 aaKnown RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 GPR78Q96P69 363 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 SMC6Q96SB8 1091 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 WWP1Q9H0M0 922 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 CNOT10Q9H9A5 744 aaKnown RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 POT1Q9NUX5 634 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 IMP3Q9NV31 184 aaKnown RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-218ENST00000555213 SLC39A10Q9ULF5 831 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 VWA7Q9Y334 891 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 PLLPQ9Y342 182 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 PCDHGA1Q9Y5H4 931 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 ST14Q9Y5Y6 855 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 HEBP2Q9Y5Z4 205 aa10.67□□□□□ -0.7
SHMT2-218ENST00000555213 ASCC3Q8N3C0 2202 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms