RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 KLC3Q6P597 504 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 CKAP2Q8WWK9 683 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 KIAA1191Q96A73 305 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 MRPL57Q9BQC6 102 aaKnown RBP10.53□□□□□ -0.72
TDP1-211ENST00000555178 COG4Q9H9E3 785 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 SLCO1B3Q9NPD5 702 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 PRDM8Q9NQV8 689 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 TBC1D29Q9UFV1 150 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 RAPGEFL1Q9UHV5 662 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 GPR34Q9UPC5 381 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 DLL1O00548 723 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 FGF3P11487 239 aaPredicted RBP10.53□□□□□ -0.72
TDP1-211ENST00000555178 TAC1P20366 129 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 DGKAP23743 735 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 AFF3P51826 1226 aaKnown RBP10.53□□□□□ -0.72
TDP1-211ENST00000555178 ABRQ12979 859 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 C18orf21Q32NC0 220 aaPredicted RBP10.53□□□□□ -0.72
TDP1-211ENST00000555178 SLC30A9Q6PML9 568 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 ZYG11AQ6WRX3 759 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 GALNT13Q8IUC8 556 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 PHACTR4Q8IZ21 702 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 MYO1HQ8N1T3 1032 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 OXR1Q8N573 874 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 PHC3Q8NDX5 983 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 OR2L2Q8NH16 312 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 CFAP61Q8NHU2 1237 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 PHF21BQ96EK2 531 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 LINC00615Q96LM1 132 aaPredicted RBP10.53□□□□□ -0.72
TDP1-211ENST00000555178 OR2M4Q96R27 311 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 LRRC61Q9BV99 259 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 C20orf27Q9GZN8 174 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 OSGEPL1Q9H4B0 414 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 SIRPGQ9P1W8 387 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 RNF112Q9ULX5 631 aa10.53□□□□□ -0.72
TDP1-211ENST00000555178 RP1P56715 2156 aa10.52□□□□□ -0.72
TDP1-211ENST00000555178 ASCC3Q8N3C0 2202 aaKnown RBP10.52□□□□□ -0.72
TDP1-211ENST00000555178 A0A1B0GTW7 788 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 MGAT4DA6NG13 374 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 A8MT66 165 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 TCP11X1B4DZS4 312 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 SUPT3HB4E1H0 165 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 QSOX1O00391 747 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 KMOO15229 486 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 CASC3O15234 703 aaKnown RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 SNX2O60749 519 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 SUPT3HO75486 399 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 SLCO2B1O94956 709 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 APOA4P06727 396 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 MYL2P10916 166 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 JUNDP17535 347 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 HTR1BP28222 390 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 NUDT1P36639 197 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 CTSKP43235 329 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 RGS4P49798 205 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 CLCA4Q14CN2 919 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 PDK4Q16654 411 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 PPP1R3AQ16821 1122 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 TTLL9Q3SXZ7 439 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 PLEKHS1Q5SXH7 462 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 PEAR1Q5VY43 1037 aaPredicted RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 FAM47EQ6ZV65 393 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 CCDC91Q7Z6B0 441 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 AMZ2Q86W34 360 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 SYT12Q8IV01 421 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 NUDCD3Q8IVD9 361 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 CNPY4Q8N129 248 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 SUMF1Q8NBK3 374 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 ASZ1Q8WWH4 475 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 ESAMQ96AP7 390 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 TMEM159Q96B96 161 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 TMEM237Q96Q45 408 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 TSSK1BQ9BXA7 367 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 TFB2MQ9H5Q4 396 aaKnown RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 ASB1Q9Y576 335 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 OR52A4PA6NMU1 304 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 SHOX2O60902 331 aaPredicted RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 KERAO60938 352 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 LYPLA1O75608 230 aaPredicted RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 SIX3O95343 332 aaPredicted RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 GUCA1CO95843 209 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 CSF2P04141 144 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 CFIP05156 583 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 MYF5P13349 255 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 CNR2P34972 360 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 AGTR2P50052 363 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 ATP6V0D1P61421 351 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 GRIK2Q13002 908 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 ZXDCQ2QGD7 858 aaPredicted RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 PRRT3Q5FWE3 981 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 METRNLQ641Q3 311 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 LCA5Q86VQ0 697 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 PARGQ86W56 976 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 ZNF75CPQ92670 426 aaPredicted RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 PDLIM5Q96HC4 596 aaKnown RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 ZNF514Q96K75 400 aaPredicted RBP10.52□□□□□ -0.73
TDP1-211ENST00000555178 RMDN2Q96LZ7 410 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 MAGEB18Q96M61 343 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 FAM107BQ9H098 131 aa10.52□□□□□ -0.73
TDP1-211ENST00000555178 WWP1Q9H0M0 922 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms