RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CARD17Q5XLA6 110 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ARSKQ6UWY0 536 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 NXF3Q9H4D5 531 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ELNP15502 786 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 FASLGP48023 281 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 MAMLD1Q13495 774 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GRHL2Q6ISB3 625 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 KIAA1161Q6NSJ0 714 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TNFAIP8L2Q6P589 184 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ATAD1Q8NBU5 361 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 C2CD2Q9Y426 696 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 FADS2P1A8MWK0 482 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 C9JVG2 144 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GLRA2P23416 452 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 RAB4BP61018 213 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CREB5Q02930 508 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF311Q5JNZ3 666 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 C6orf52Q5T4I8 152 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TEX19Q8NA77 164 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 PTCD3Q96EY7 689 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CERS2Q96G23 380 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GORASP1Q9BQQ3 440 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GPATCH1Q9BRR8 931 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 DNAAF2Q9NVR5 837 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CABYRO75952 493 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 RFX5P48382 616 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ITPK1Q13572 414 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 IL23RQ5VWK5 629 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GPR139Q6DWJ6 353 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 RFWD3Q6PCD5 774 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 BAP1Q92560 729 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 OTUB2Q96DC9 234 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 SLC35G5Q96KT7 338 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CEP170Q5SW79 1584 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 DAPL1A0PJW8 107 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TISP43B9A030 160 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CSTBP04080 98 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ALPPP05187 535 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 PSKH1P11801 424 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 DCKP27707 260 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 RNF144AP50876 292 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 DCDC1P59894 354 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 C1QTNF8P60827 252 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GTF2H2Q13888 395 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GRM3Q14832 879 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 FBXO48Q5FWF7 155 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 FAM76BQ5HYJ3 339 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GTF2H2CQ6P1K8 395 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 SCGB1C1Q8TD33 95 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TIFAQ96CG3 184 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 RC3H2Q9HBD1 1191 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 POLMQ9NP87 494 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CTPS2Q9NRF8 586 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 MFHAS1Q9Y4C4 1052 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TEX13DA0A0J9YY54 714 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 MSCO60682 206 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 DNAJA1P31689 397 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TIE1P35590 1138 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 VGLL4Q14135 290 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 VPS26BQ4G0F5 336 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 MTFR2Q6P444 385 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 KCTD9Q7L273 389 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 SPAG16Q8N0X2 631 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF676Q8N7Q3 588 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 NDRG1Q92597 394 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 B8ZZF3 427 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ORC5O43913 435 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 FMO3P31513 532 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 DGKEP52429 567 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 WNT3AP56704 352 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ATP6V0D1P61421 351 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 MPP1Q00013 466 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SLC10A7Q0GE19 358 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ITGA7Q13683 1181 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TMED4Q7Z7H5 227 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TRPM4Q8TD43 1214 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ATXN10Q9UBB4 475 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 AK5Q9Y6K8 562 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 PRR36Q9H6K5 1346 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GLI2P10070 1586 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 KIR3DL1P43629 444 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CLRN1P58418 232 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CACNG1Q06432 222 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 SEMA3AQ14563 771 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CELF3Q5SZQ8 465 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 FRMD7Q6ZUT3 714 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF527Q8NB42 609 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 STK32AQ8WU08 396 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 EURLQ9NYK6 297 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 FRMPD4Q14CM0 1322 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 HEATR1Q9H583 2144 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 PRNPP04156 253 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF135P52742 658 aaPredicted RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 RPL6Q02878 288 aaKnown RBP6.78□□□□□ -1.32
SYNE2-216ENST00000555002 TROAPQ12815 778 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GRK1Q15835 563 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 CLNKQ7Z7G1 428 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 GPAT4Q86UL3 456 aa6.78□□□□□ -1.32
SYNE2-216ENST00000555002 LAPTM4BQ86VI4 370 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms