RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MPOP05164 745 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 SLC35E2BP0CK96 405 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 MTHFD1P11586 935 aaKnown RBP16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 SLCO1A2P46721 670 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 FASLGP48023 281 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 ZNF844Q08AG5 666 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 CLCA4Q14CN2 919 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 SEPT7Q16181 437 aaKnown RBP16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 RPE65Q16518 533 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 C14orf28Q4W4Y0 310 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 RAPH1Q70E73 1250 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 HDXQ7Z353 690 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 SLC9B2Q86UD5 537 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 VRK3Q8IV63 474 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 MYO1HQ8N1T3 1032 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 MAPK15Q8TD08 544 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 UBXN10Q96LJ8 280 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 ZIM3Q96PE6 472 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 INSM2Q96T92 566 aaPredicted RBP16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 MVB12BQ9H7P6 319 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 VIPAS39Q9H9C1 493 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 PSMD13Q9UNM6 376 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 ACOT9Q9Y305 439 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 COLEC10Q9Y6Z7 277 aa16.06■□□□□ 0.16
SPTLC2-203ENST00000554901 ARID1BQ8NFD5 2236 aaPredicted RBP16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 TLDC2A0PJX2 215 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 PHGDHO43175 533 aaKnown RBP16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 SIGLEC6O43699 453 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 TSPAN12O95859 305 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 C2P06681 752 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 COL6A2P12110 1019 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 CCNFP41002 786 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 DUSP3P51452 185 aaPredicted RBP16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 UBE2IP63279 158 aaKnown RBP16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 TMEM207Q6UWW9 146 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 CYHR1Q6ZMK1 362 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 CMC1Q7Z7K0 106 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 TBC1D1Q86TI0 1168 aaPredicted RBP16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 LCA5Q86VQ0 697 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 EID2Q8N6I1 236 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 MAGEC3Q8TD91 643 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 NETO1Q8TDF5 533 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 RHBDD1Q8TEB9 315 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 SLC37A2Q8TED4 501 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 MZB1Q8WU39 189 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 EEF1AKMT1Q8WVE0 214 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 SH3KBP1Q96B97 665 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 CXorf40BQ96DE9 158 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 LINGO1Q96FE5 620 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 C12orf66Q96MD2 445 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 DERL2Q9GZP9 239 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 UCK1Q9HA47 277 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 SCHIP1Q9P0W5 487 aaPredicted RBP16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 CPNE7Q9UBL6 633 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 TBK1Q9UHD2 729 aa16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 ARHGEF17Q96PE2 2063 aaPredicted RBP16.05■□□□□ 0.16
SPTLC2-203ENST00000554901 A0A096LPK6 155 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 SMIM23A6NLE4 172 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 NUDT21O43809 227 aaKnown RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 GDF9O60383 454 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 RFPL1O75677 317 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 SLC19A1P41440 591 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 ATP6V0D1P61421 351 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 SP140Q13342 867 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 ZNF460Q14592 562 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 NR0B2Q15466 257 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 PROX2Q3B8N5 592 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 KRT71Q3SY84 523 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 RASGRP3Q8IV61 690 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 NAXDQ8IW45 347 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 TRIM48Q8IWZ4 208 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 SLC35F3Q8IY50 421 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 TBC1D21Q8IYX1 336 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 ARL14Q8N4G2 192 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 FBXO15Q8NCQ5 510 aaPredicted RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 SKA2Q8WVK7 121 aaPredicted RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 ASB11Q8WXH4 323 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 APOLD1Q96LR9 279 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 RUFY1Q96T51 708 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 CDC6Q99741 560 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 IMP3Q9NV31 184 aaKnown RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 ZNF624Q9P2J8 865 aaPredicted RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 CTNNAL1Q9UBT7 734 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 POLG2Q9UHN1 485 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 ASF1AQ9Y294 204 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 COL5A1P20908 1838 aaPredicted RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 OR52A4PA6NMU1 304 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 GFYI3L273 518 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 SLC16A5O15375 505 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 KDM1AO60341 852 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 PSIP1O75475 530 aaKnown RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 VIPP01282 170 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 MT-ND3P03897 115 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 CATP04040 527 aaKnown RBP16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 C8GP07360 202 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 CCDC166P0CW27 439 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 CKMT1AP12532 417 aa16.04■□□□□ 0.16
SPTLC2-203ENST00000554901 PNLIPP16233 465 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms