RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RAP2AP10114 183 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 ICAM2P13598 275 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 IGFBP6P24592 240 aaPredicted RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 HRH2P25021 359 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 SLC26A3P40879 764 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 LILRA4P59901 499 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 FAPQ12884 760 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 TRIP4Q15650 581 aaPredicted RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 INTS6LQ5JSJ4 861 aaKnown RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 SPANXN2Q5MJ10 180 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 PKN3Q6P5Z2 889 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 AMIGO1Q86WK6 493 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 DCP1BQ8IZD4 617 aaKnown RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 MIER2Q8N344 545 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 DNAJB14Q8TBM8 379 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 TOE1Q96GM8 510 aaKnown RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 NSMCE2Q96MF7 247 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 NEDD4LQ96PU5 975 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 VAT1Q99536 393 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 RBM4BQ9BQ04 359 aaKnown RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 MED10Q9BTT4 135 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 RBM4Q9BWF3 364 aaKnown RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 CDADC1Q9BWV3 514 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 ACOT13Q9NPJ3 140 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 EXD2Q9NVH0 621 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 B3GNT2Q9NY97 397 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 IPPQ9Y573 584 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 RALGAPA2Q2PPJ7 1873 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 FAM95CA0A1B0GW59 222 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 NOBOXO60393 691 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 SUPT7LO94864 414 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 STMN1P16949 149 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 JUNDP17535 347 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 HTR1EP28566 365 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 TALDO1P37837 337 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 PNPLA4P41247 253 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 AIF1P55008 147 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 SLAMF1Q13291 335 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 DSC3Q14574 896 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 KIAA0319Q5VV43 1072 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 ESRP1Q6NXG1 681 aaKnown RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 DEDD2Q8WXF8 326 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 DDIT4Q9NX09 232 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 C3orf18Q9UK00 162 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 OAS3Q9Y6K5 1087 aaKnown RBP15.4■□□□□ 0.06
SYNE3-203ENST00000554873 NRCAMQ92823 1304 aa15.4■□□□□ 0.06
SYNE3-203ENST00000554873 UGT2B17O75795 530 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 FADS2O95864 444 aaKnown RBP15.39■□□□□ 0.06
SYNE3-203ENST00000554873 MT-ND2P03891 347 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 WARSP23381 471 aaKnown RBP15.39■□□□□ 0.06
SYNE3-203ENST00000554873 UGT2B15P54855 530 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 IL5RAQ01344 420 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 PCID2Q5JVF3 399 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 SULT1C3Q6IMI6 304 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 CYHR1Q6ZMK1 362 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 EFL1Q7Z2Z2 1120 aaKnown RBP15.39■□□□□ 0.06
SYNE3-203ENST00000554873 HEXDCQ8WVB3 486 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 UCK2Q9BZX2 261 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 NDFIP2Q9NV92 336 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 SCN3BQ9NY72 215 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 CCDC59Q9P031 241 aaKnown RBP15.39■□□□□ 0.06
SYNE3-203ENST00000554873 OR12D3Q9UGF7 316 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 PCDHGB2Q9Y5G2 931 aa15.39■□□□□ 0.06
SYNE3-203ENST00000554873 AIREO43918 545 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 PGLSO95336 258 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 MT-CYBP00156 380 aaPredicted RBP15.39■□□□□ 0.05
SYNE3-203ENST00000554873 HNF4AP41235 474 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 MAPK12P53778 367 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 DAOAP59103 153 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 TAS2R39P59534 338 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 NFYCQ13952 458 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 UGP2Q16851 508 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 SV2CQ496J9 727 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 FAM98BQ52LJ0 330 aaKnown RBP15.39■□□□□ 0.05
SYNE3-203ENST00000554873 WSCD1Q658N2 575 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 CREB3L2Q70SY1 520 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 CNTN4Q8IWV2 1026 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 GLB1L3Q8NCI6 653 aaPredicted RBP15.39■□□□□ 0.05
SYNE3-203ENST00000554873 GALNT11Q8NCW6 608 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 OR4M1Q8NGD0 313 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 SLC16A10Q8TF71 515 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 SLC38A4Q969I6 547 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 OR2A14Q96R47 310 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 SDHCQ99643 169 aaPredicted RBP15.39■□□□□ 0.05
SYNE3-203ENST00000554873 COLEC11Q9BWP8 271 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 C14orf119Q9NWQ9 140 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 CXCL11O14625 94 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 DSCR3O14972 297 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 CYP2A6P11509 494 aaPredicted RBP15.39■□□□□ 0.05
SYNE3-203ENST00000554873 NKX3-2P78367 333 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 FAM83EQ2M2I3 478 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 MOB2Q70IA6 237 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 GPRIN1Q7Z2K8 1008 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 OR10Z1Q8NGY1 313 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 ELMO1Q92556 727 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.39■□□□□ 0.05
SYNE3-203ENST00000554873 SLC2A6Q9UGQ3 507 aa15.39■□□□□ 0.05
SYNE3-203ENST00000554873 NUFIP1Q9UHK0 495 aaKnown RBP15.39■□□□□ 0.05
SYNE3-203ENST00000554873 TRMT6Q9UJA5 497 aaKnown RBP15.39■□□□□ 0.05
SYNE3-203ENST00000554873 BPTFQ12830 3046 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms