RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SPAM1P38567 509 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 CCNFP41002 786 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 FASLGP48023 281 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 UCNP55089 124 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 SESN2P58004 480 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-214ENST00000554604 GPLD1P80108 840 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 HHEXQ03014 270 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 GTF2H3Q13889 308 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 CRYMQ14894 314 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 CLPPQ16740 277 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-214ENST00000554604 ATP13A5Q4VNC0 1218 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 HHATQ5VTY9 493 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 TRMT10BQ6PF06 316 aaKnown RBP12.21□□□□□ -0.45
SHMT2-214ENST00000554604 TIFABQ6ZNK6 161 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 TMPRSS9Q7Z410 1059 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 ADGRG6Q86SQ4 1221 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 CLEC14AQ86T13 490 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 LINC00523Q86TU6 105 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 LRRTM4Q86VH4 590 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 SLITRK4Q8IW52 837 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 SFRP1Q8N474 314 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 ANKS4BQ8N8V4 417 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 FCRL3Q96P31 734 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-214ENST00000554604 NUDT22Q9BRQ3 303 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 FICDQ9BVA6 458 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 SEMA6CQ9H3T2 930 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 SYBUQ9NX95 663 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 BFARQ9NZS9 450 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 PIKFYVEQ9Y2I7 2098 aa12.21□□□□□ -0.45
SHMT2-214ENST00000554604 FASNP49327 2511 aaKnown RBP12.2□□□□□ -0.46
SHMT2-214ENST00000554604 IGHV1OR21-1A0A087WYE8 117 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 KIR2DS5A0A0G2JLQ3 304 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 A0A0G2JNG1 304 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 OR5K4A6NMS3 321 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 TRIM49D1C9J1S8 452 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 KIR2DS3K7RE56 304 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 KMOO15229 486 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 STX7O15400 261 aaKnown RBP12.2□□□□□ -0.46
SHMT2-214ENST00000554604 BUD23O43709 281 aaKnown RBP12.2□□□□□ -0.46
SHMT2-214ENST00000554604 MTX2O75431 263 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 PIAS1O75925 651 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 USP1O94782 785 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 EML2O95834 649 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 POLBP06746 335 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 F3P13726 295 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 CD1CP29017 333 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 SLC5A2P31639 672 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 CXADRP78310 365 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 MGAT5Q09328 741 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 NFATC2Q13469 925 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 KIR2DS5Q14953 304 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 SEPT7Q16181 437 aaKnown RBP12.2□□□□□ -0.46
SHMT2-214ENST00000554604 PLA2G4EQ3MJ16 856 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 NKAIN2Q5VXU1 208 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 ARMC3Q5W041 872 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 CASC4Q6P4E1 433 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 IYDQ6PHW0 289 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 FAM151BQ6UXP7 276 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 SLC9B2Q86UD5 537 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 ZNF761Q86XN6 746 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-214ENST00000554604 TRAPPC5Q8IUR0 188 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 TTC30BQ8N4P2 665 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 AVL9Q8NBF6 648 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 OR52K1Q8NGK4 314 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 OR10G6Q8NH81 332 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 TCP10LQ8TDR4 215 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 SH3KBP1Q96B97 665 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 VPS35Q96QK1 796 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 DPYSL5Q9BPU6 564 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 ELAC2Q9BQ52 826 aaKnown RBP12.2□□□□□ -0.46
SHMT2-214ENST00000554604 PLCD4Q9BRC7 762 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 ZCCHC2Q9C0B9 1178 aaKnown RBP12.2□□□□□ -0.46
SHMT2-214ENST00000554604 VPS11Q9H270 941 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 SARS2Q9NP81 518 aaKnown RBP12.2□□□□□ -0.46
SHMT2-214ENST00000554604 IL26Q9NPH9 171 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 FGFR1OP2Q9NVK5 253 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 IL17CQ9P0M4 197 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 DNAJC16Q9Y2G8 782 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 PCDHGA7Q9Y5G6 932 aa12.2□□□□□ -0.46
SHMT2-214ENST00000554604 IGHV5-10-1A0A0J9YXX1 117 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 GLYATL1P3A0A0U1RQE8 302 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 FAM237BA0A1B0GVD1 139 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 C2orf81A6NN90 581 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 PDZK1P1A8MUH7 402 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 HGSO14964 777 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 CHUKO15111 745 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 DUX1O43812 170 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 DHRS4L1P0CG22 281 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 PYGBP11216 843 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 ZNF7P17097 686 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 VCLP18206 1134 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 ITIH1P19827 911 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 LPOP22079 712 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 LIMK2P53671 638 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 MAPK10P53779 464 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 CDH17Q12864 832 aa12.19□□□□□ -0.46
SHMT2-214ENST00000554604 TMEM115Q12893 351 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-214ENST00000554604 IFT88Q13099 833 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms