RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 NFE2L1Q14494 772 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 SETDB1Q15047 1291 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 PCBP2Q15366 365 aaKnown RBP eCLIP7.48□□□□□ -1.21
TDP1-209ENST00000554180 PHKG1Q16816 387 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 PLA2G4EQ3MJ16 856 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 ENPP7Q6UWV6 458 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 WASH2PQ6VEQ5 465 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 NAPRTQ6XQN6 538 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 UBE2R2Q712K3 238 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 CHST15Q7LFX5 561 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 HOMEZQ8IX15 550 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 CFAP206Q8IYR0 622 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 SLC22A18ASQ8N1D0 253 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 LILRA3Q8N6C8 439 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 PTGR2Q8N8N7 351 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 TMEM105Q8N8V8 129 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 DTWD2Q8NBA8 298 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 PHC3Q8NDX5 983 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 MAGEC3Q8TD91 643 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 GAB3Q8WWW8 586 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 ATL1Q8WXF7 558 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 OR1E3Q8WZA6 343 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 DLG3Q92796 817 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 NELL1Q92832 810 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 SKA1Q96BD8 255 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 GRAMD1AQ96CP6 724 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 KLHDC7BQ96G42 594 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 HIST1H2AHQ96KK5 128 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 CNDP1Q96KN2 507 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 SLC6A18Q96N87 628 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 HIST1H2AJQ99878 128 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 H2AFJQ9BTM1 129 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 DRC3Q9H069 523 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 CYP4F12Q9HCS2 524 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 WASH6PQ9NQA3 447 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 AASDHPPTQ9NRN7 309 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 CD274Q9NZQ7 290 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 SLC23A2Q9UGH3 650 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 EIF2B4Q9UI10 523 aaKnown RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 ADAMTS6Q9UKP5 1117 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 PCOLCE2Q9UKZ9 415 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 PDE10AQ9Y233 779 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 CA5BQ9Y2D0 317 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 PCYT1BQ9Y5K3 369 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 A0A0C4DFX4 3053 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 NEMP2A6NFY4 417 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 ARHGEF33A8MVX0 844 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 PRR5-ARHGAP8B1AHC4 643 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 TGDSO95455 350 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 VIMP08670 466 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 RPS17P08708 135 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 ANXA5P08758 320 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 NME1P15531 152 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 BCKDHBP21953 392 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 IDSP22304 550 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 MAP4P27816 1152 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 PDHA2P29803 388 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 GGT5P36269 586 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 DPP6P42658 865 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 SLC1A6P48664 564 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 PIK3CGP48736 1102 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 RPIAP49247 311 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 AFF3P51826 1226 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 HK2P52789 917 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 HK3P52790 923 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 NUBP1P53384 320 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 NAGLUP54802 743 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 ABCE1P61221 599 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 CTBSQ01459 385 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 CSTF1Q05048 431 aaKnown RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 DMWDQ09019 674 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 ILF3Q12906 894 aaKnown RBP eCLIP7.47□□□□□ -1.21
TDP1-209ENST00000554180 FZD2Q14332 565 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 PFKFB4Q16877 469 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 ALG11Q2TAA5 492 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 UAP1L1Q3KQV9 507 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 CFAP157Q5JU67 520 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 ZNF678Q5SXM1 525 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 TPRG1LQ5T0D9 272 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 PMS2CLQ68D20 193 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 TSSK4Q6SA08 328 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 FAM83HQ6ZRV2 1179 aaPredicted RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 ZCCHC23Q6ZST2 131 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 FRMD7Q6ZUT3 714 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 FAM47EQ6ZV65 393 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 CPLX4Q7Z7G2 160 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 SPNS2Q8IVW8 549 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 DCUN1D3Q8IWE4 304 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 LRRC34Q8IZ02 419 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 RGL4Q8IZJ4 473 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 MAML2Q8IZL2 1156 aaPredicted RBP7.47□□□□□ -1.21
TDP1-209ENST00000554180 PPP4R1Q8TF05 950 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 EXT2Q93063 718 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 RHBDF1Q96CC6 855 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 PHF21BQ96EK2 531 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 RMDN2Q96LZ7 410 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 CCDC138Q96M89 665 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 TMEM237Q96Q45 408 aa7.47□□□□□ -1.21
TDP1-209ENST00000554180 SIKE1Q9BRV8 207 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms