RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 PSMD13Q9UNM6 376 aa18.9■□□□□ 0.62
PSEN1-207ENST00000553599 WDR37Q9Y2I8 494 aa18.9■□□□□ 0.62
PSEN1-207ENST00000553599 ZFHX2Q9C0A1 2572 aaPredicted RBP18.9■□□□□ 0.62
PSEN1-207ENST00000553599 EP300Q09472 2414 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-207ENST00000553599 A0A096LPK6 155 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 CCDC189A1A4V9 331 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 B4DGG1 531 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 PHGDHO43175 533 aaKnown RBP18.89■□□□□ 0.61
PSEN1-207ENST00000553599 GFRA3O60609 400 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 MATN4O95460 622 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 TSPAN12O95859 305 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 MT-ND3P03897 115 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 C2P06681 752 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 COL6A2P12110 1019 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 KRT15P19012 456 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 RPIAP49247 311 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 CLCA4Q14CN2 919 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 RPE65Q16518 533 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 SLC9B2Q86UD5 537 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 OR6C4Q8NGE1 309 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 MAPK15Q8TD08 544 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 TFGQ92734 400 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-207ENST00000553599 LINGO1Q96FE5 620 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 INSM2Q96T92 566 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-207ENST00000553599 DERL2Q9GZP9 239 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 STN1Q9H668 368 aaKnown RBP18.89■□□□□ 0.61
PSEN1-207ENST00000553599 MVB12BQ9H7P6 319 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 RXFP3Q9NSD7 469 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 POT1Q9NUX5 634 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 CTNNAL1Q9UBT7 734 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 COLEC10Q9Y6Z7 277 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 WDR87Q6ZQQ6 2873 aa18.89■□□□□ 0.61
PSEN1-207ENST00000553599 GOLGA6L10A6NI86 522 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 C4orf47A7E2U8 309 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 SLC16A5O15375 505 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 NOBOXO60393 691 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 RFPL1O75677 317 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 EML2O95834 649 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 C8GP07360 202 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 MTHFD1P11586 935 aaKnown RBP18.88■□□□□ 0.61
PSEN1-207ENST00000553599 CD59P13987 128 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 CCNFP41002 786 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 FASLGP48023 281 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 ATP6V0D1P61421 351 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 SP140Q13342 867 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 ZNF460Q14592 562 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 C14orf28Q4W4Y0 310 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 TMEM207Q6UWW9 146 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 CYHR1Q6ZMK1 362 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 SPDYE1Q8NFV5 336 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-207ENST00000553599 MAGEC3Q8TD91 643 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 SKA2Q8WVK7 121 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-207ENST00000553599 SH3KBP1Q96B97 665 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 CXorf40BQ96DE9 158 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 PGM2Q96G03 612 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 C12orf66Q96MD2 445 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 STMN4Q9H169 189 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-207ENST00000553599 NMRAL1Q9HBL8 299 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 SENP1Q9P0U3 644 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 SCHIP1Q9P0W5 487 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-207ENST00000553599 POLG2Q9UHN1 485 aa18.88■□□□□ 0.61
PSEN1-207ENST00000553599 TRIM38O00635 465 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 RGS16O15492 202 aaPredicted RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 SIGLEC6O43699 453 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 KDM1AO60341 852 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 PSIP1O75475 530 aaKnown RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 VIPP01282 170 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 CATP04040 527 aaKnown RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 MYZAPP0CAP1 466 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 CCDC166P0CW27 439 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 DUSP3P51452 185 aaPredicted RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 UBE2IP63279 158 aaKnown RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 FAM83EQ2M2I3 478 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 STPG1Q5TH74 334 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 TTC23LQ6PF05 361 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 TRIM48Q8IWZ4 208 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 TBC1D21Q8IYX1 336 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 CYP4X1Q8N118 509 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 EID2Q8N6I1 236 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 FBXO15Q8NCQ5 510 aaPredicted RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 OR5K2Q8NHB8 316 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 SLC37A2Q8TED4 501 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 ASB11Q8WXH4 323 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 TRIT1Q9H3H1 467 aaKnown RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 ACBD3Q9H3P7 528 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 UCK1Q9HA47 277 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 IMP3Q9NV31 184 aaKnown RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 ZNF624Q9P2J8 865 aaPredicted RBP18.87■□□□□ 0.61
PSEN1-207ENST00000553599 CPNE7Q9UBL6 633 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 ASF1AQ9Y294 204 aa18.87■□□□□ 0.61
PSEN1-207ENST00000553599 ARHGEF17Q96PE2 2063 aaPredicted RBP18.86■□□□□ 0.61
PSEN1-207ENST00000553599 COL5A1P20908 1838 aaPredicted RBP18.86■□□□□ 0.61
PSEN1-207ENST00000553599 ZNF292O60281 2723 aa18.86■□□□□ 0.61
PSEN1-207ENST00000553599 OR52A4PA6NMU1 304 aa18.86■□□□□ 0.61
PSEN1-207ENST00000553599 GFYI3L273 518 aa18.86■□□□□ 0.61
PSEN1-207ENST00000553599 DYNC1I1O14576 645 aa18.86■□□□□ 0.61
PSEN1-207ENST00000553599 NUDT21O43809 227 aaKnown RBP18.86■□□□□ 0.61
PSEN1-207ENST00000553599 ZBTB14O43829 449 aa18.86■□□□□ 0.61
PSEN1-207ENST00000553599 KLHL2O95198 593 aa18.86■□□□□ 0.61
PSEN1-207ENST00000553599 LTA4HP09960 611 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms