RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SLC38A9Q8NBW4 561 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 OR6P1Q8NGX9 317 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 STARD8Q92502 1023 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 MED8Q96G25 268 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 RANBP9Q96S59 729 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 SPHK1Q9NYA1 384 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 TSR3Q9UJK0 312 aaKnown RBP17.71■□□□□ 0.43
SHMT2-206ENST00000553529 BAHCC1Q9P281 2608 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 UBA6A0AVT1 1052 aaPredicted RBP17.7■□□□□ 0.42
SHMT2-206ENST00000553529 HEATR9A2RTY3 570 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 TLCD2A6NGC4 264 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 TOX3O15405 576 aaPredicted RBP17.7■□□□□ 0.42
SHMT2-206ENST00000553529 ST6GAL1P15907 406 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 ADRA1DP25100 572 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 CCR7P32248 378 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 DLSTP36957 453 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 ABRQ12979 859 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 SKIDA1Q1XH10 827 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 AFTPHQ6ULP2 937 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 C6orf15Q6UXA7 325 aaPredicted RBP17.7■□□□□ 0.42
SHMT2-206ENST00000553529 GSTA5Q7RTV2 222 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 TMEM151BQ8IW70 566 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 LSM14AQ8ND56 463 aaKnown RBP17.7■□□□□ 0.42
SHMT2-206ENST00000553529 COG1Q8WTW3 980 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 CT55Q8WUE5 264 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 LCN9Q8WX39 176 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 TFGQ92734 400 aaPredicted RBP17.7■□□□□ 0.42
SHMT2-206ENST00000553529 LRRC45Q96CN5 670 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 FRMD8P1Q9BZ68 369 aaPredicted RBP17.7■□□□□ 0.42
SHMT2-206ENST00000553529 TRIM4Q9C037 500 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 POMT2Q9UKY4 750 aa17.7■□□□□ 0.42
SHMT2-206ENST00000553529 RUVBL2Q9Y230 463 aaKnown RBP17.7■□□□□ 0.42
SHMT2-206ENST00000553529 PCSK5Q92824 1860 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 C17orf113A0A1B0GUU1 675 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 SLC5A10A0PJK1 596 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 TMEM63AO94886 807 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 MAP4P27816 1152 aaKnown RBP17.69■□□□□ 0.42
SHMT2-206ENST00000553529 ACADLP28330 430 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 PEBP1P30086 187 aaKnown RBP17.69■□□□□ 0.42
SHMT2-206ENST00000553529 NSG1P42857 185 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 CDC20Q12834 499 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 DEFB110Q30KQ9 67 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 PACS1Q6VY07 963 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 PPP1R3BQ86XI6 285 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 REXO1L1PQ8IX06 675 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 ADGRF3Q8IZF5 1079 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 C2orf73Q8N5S3 287 aaPredicted RBP17.69■□□□□ 0.42
SHMT2-206ENST00000553529 ZSCAN1Q8NBB4 408 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 ACVR1CQ8NER5 493 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 OR4L1Q8NH43 312 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 FAM136AQ96C01 138 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 MFSD3Q96ES6 412 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 C19orf43Q9BQ61 176 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 ARHGAP9Q9BRR9 750 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 SRMSQ9H3Y6 488 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 FGF21Q9NSA1 209 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 TREX1Q9NSU2 369 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 CDYLQ9Y232 598 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 KLHL20Q9Y2M5 609 aa17.69■□□□□ 0.42
SHMT2-206ENST00000553529 TDRKHQ9Y2W6 561 aaKnown RBP17.69■□□□□ 0.42
SHMT2-206ENST00000553529 USP27XA6NNY8 438 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 ERI2A8K979 691 aaKnown RBP17.68■□□□□ 0.42
SHMT2-206ENST00000553529 K7EM74 188 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 ZNF185O15231 689 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 ZNF189O75820 626 aaPredicted RBP17.68■□□□□ 0.42
SHMT2-206ENST00000553529 ABHD18Q0P651 414 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 GPS2Q13227 327 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 ITIH4Q14624 930 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 ZIC1Q15915 447 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 DEFB109BQ30KR1 87 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 DRICH1Q6PGQ1 229 aaPredicted RBP17.68■□□□□ 0.42
SHMT2-206ENST00000553529 TAX1BP1Q86VP1 789 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 AGGF1Q8N302 714 aaeCLIP17.68■□□□□ 0.42
SHMT2-206ENST00000553529 SLC35F6Q8N357 371 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 D2HGDHQ8N465 521 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 PPHLN1Q8NEY8 458 aaKnown RBP17.68■□□□□ 0.42
SHMT2-206ENST00000553529 TRIM58Q8NG06 486 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 FLVCR1-AS1Q8TAF5 88 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 UBXN4Q92575 508 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 ZNF501Q96CX3 271 aaPredicted RBP17.68■□□□□ 0.42
SHMT2-206ENST00000553529 STAMBPL1Q96FJ0 436 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 WBP1Q96G27 269 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 SLC45A3Q96JT2 553 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 IL17FQ96PD4 163 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 GRPEL1Q9HAV7 217 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 SOHLH2Q9NX45 425 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 TRMT1Q9NXH9 659 aaKnown RBP17.68■□□□□ 0.42
SHMT2-206ENST00000553529 RARRES3Q9UL19 164 aa17.68■□□□□ 0.42
SHMT2-206ENST00000553529 DRG1Q9Y295 367 aaKnown RBP17.68■□□□□ 0.42
SHMT2-206ENST00000553529 CFAP46Q8IYW2 2715 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 ZNF891A8MT65 544 aaPredicted RBP17.67■□□□□ 0.42
SHMT2-206ENST00000553529 GOLGA8MH3BSY2 632 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 IFRD1O00458 451 aaPredicted RBP17.67■□□□□ 0.42
SHMT2-206ENST00000553529 KATNA1O75449 491 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 AP2A2O94973 939 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 NR1D1P20393 614 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 CDH3P22223 829 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 PRDX3P30048 256 aaKnown RBP17.67■□□□□ 0.42
SHMT2-206ENST00000553529 POLE2P56282 527 aa17.67■□□□□ 0.42
SHMT2-206ENST00000553529 FOXL2P58012 376 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms