RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 GGT5P36269 586 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 GSTM4Q03013 218 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 TMEM198Q66K66 360 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 KBTBD6Q86V97 674 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 CEP70Q8NHQ1 597 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 ACTRT2Q8TDY3 377 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 C3orf30Q96M34 536 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 SLC17A9Q9BYT1 436 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 LRMDAQ9H2I8 198 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 TUBB1Q9H4B7 451 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 ZNF385DQ9H6B1 395 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 PREBQ9HCU5 417 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 NDRG2Q9UN36 371 aaKnown RBP19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 ST14Q9Y5Y6 855 aa19.13■□□□□ 0.65
RBFOX1-215ENST00000553186 NUMA1Q14980 2115 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 C17orf113A0A1B0GUU1 675 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 LOC730098B7Z3J9 87 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 LIN7AO14910 233 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 DCXO43602 365 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 POP7O75817 140 aaKnown RBP19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 IL9P15248 144 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 ABRQ12979 859 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 SGCGQ13326 291 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 RBBP7Q16576 425 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 GPRIN3Q6ZVF9 776 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 HORMAD1Q86X24 394 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 KIF2BQ8N4N8 673 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TEX9Q8N6V9 391 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TWIST2Q8WVJ9 160 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 C19orf60Q96EN9 201 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TRIM54Q9BYV2 358 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 ARHGEF3Q9NR81 526 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 KLC4Q9NSK0 619 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 OR1A2Q9Y585 309 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 CAPN7Q9Y6W3 813 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3DA0A087WVF3 549 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3IA0A087WXS9 549 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3EA0A087X179 549 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3KA0A087X1G2 549 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3FA6NER0 549 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3LB9A6J9 549 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 CCNT2O60583 730 aaKnown RBP19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 ENO1P06733 434 aaKnown RBP19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 HIST1H2AGP0C0S8 130 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3HP0C7X1 549 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 HIST1H2ADP20671 130 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 CYP2A7P20853 494 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 PKNOX1P55347 436 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 AP1S2P56377 157 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 ERVPABLB-1P60509 514 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 MLF2Q15773 248 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3GQ6DHY5 549 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 NXNQ6DKJ4 435 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3CQ6IPX1 549 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 LETMD1Q6P1Q0 360 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 CRTC3Q6UUV7 619 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 CFAP206Q8IYR0 622 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TBC1D3Q8IZP1 549 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 ZNF687Q8N1G0 1237 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 OR2L2Q8NH16 312 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 MCOLN3Q8TDD5 553 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 FOXJ1Q92949 421 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 HIST1H2AHQ96KK5 128 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 CDK15Q96Q40 435 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 HIST1H2AJQ99878 128 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 H2AFJQ9BTM1 129 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 WDR26Q9H7D7 661 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 IPPKQ9H8X2 491 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 TIMM22Q9Y584 194 aa19.12■□□□□ 0.65
RBFOX1-215ENST00000553186 KRT87PA6NCN2 255 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 ARHGEF33A8MVX0 844 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 HNRNPCL1O60812 293 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 PPP2CBP62714 309 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 KCNJ2P63252 427 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 PPP2CAP67775 309 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 NEK5Q6P3R8 708 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 DOK6Q6PKX4 331 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 Q6ZS52 159 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 LARP4Q71RC2 724 aaKnown RBP eCLIP19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 CPSF7Q8N684 471 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 DCBLD1Q8N8Z6 715 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 OPTCQ9UBM4 332 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 DUSP12Q9UNI6 340 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 NCKAP1Q9Y2A7 1128 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 PTGDR2Q9Y5Y4 395 aa19.11■□□□□ 0.65
RBFOX1-215ENST00000553186 TCRBV21S2A2A0A5A6 115 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 K7EPI3 171 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 MAN2B1O00754 1011 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 PIP5K1BO14986 540 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 STK16O75716 305 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 OR4F21O95013 312 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 UROSP10746 265 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 ACADMP11310 421 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 ESRRAP11474 423 aaPredicted RBP19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 GABRG2P18507 467 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 HNMTP50135 292 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 RASSF2P50749 326 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 TRAF3Q13114 568 aa19.1■□□□□ 0.65
RBFOX1-215ENST00000553186 KIAA1324Q6UXG2 1013 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms