RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 NOMO1Q15155 1222 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 DEFB110Q30KQ9 67 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 ATP13A4Q4VNC1 1196 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 CYB5D1Q6P9G0 228 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 IGFL2Q6UWQ7 119 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 BNC2Q6ZN30 1099 aaPredicted RBP8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 CDHR3Q6ZTQ4 885 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 RBM12BQ8IXT5 1001 aaKnown RBP8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 RAVER1Q8IY67 606 aaKnown RBP8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 SLC35F6Q8N357 371 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 BBS5Q8N3I7 341 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 TXLNBQ8N3L3 684 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 TRAM1L1Q8N609 369 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 CNTD1Q8N815 330 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 CLEC1AQ8NC01 280 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 BTBD6Q96KE9 485 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 TRIB3Q96RU7 358 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 CD180Q99467 661 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 NAPGQ99747 312 aaPredicted RBP8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 CEP41Q9BYV8 373 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 LACRTQ9GZZ8 138 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 UGT1A7Q9HAW7 530 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 UGT1A10Q9HAW8 530 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 UGT1A8Q9HAW9 530 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 ZFYVE1Q9HBF4 777 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 SLC6A20Q9NP91 592 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 SLC22A11Q9NSA0 550 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 DHCR7Q9UBM7 475 aaKnown RBP8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 FAM8A1Q9UBU6 413 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 SLC24A2Q9UI40 661 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 SH3BGRL2Q9UJC5 107 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 KLF2Q9Y5W3 355 aaPredicted RBP8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 BZW2Q9Y6E2 419 aaKnown RBP8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 SEC16AO15027 2179 aa8.39□□□□□ -1.07
AC055716.1-201ENST00000550077 CTAGE9A4FU28 777 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 RGSL1A5PLK6 1076 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 BTNL10A8MVZ5 291 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 EFCAB8A8MWE9 144 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 MATN3O15232 486 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 ZNHIT1O43257 154 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 VEGFDO43915 354 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 RNF8O76064 485 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 URI1O94763 535 aaPredicted RBP8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 ALPPP05187 535 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 ITGAXP20702 1163 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 CYP2A7P20853 494 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 CDH3P22223 829 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 MST1P26927 711 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 ARL4AP40617 200 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 HALP42357 657 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 PREPP48147 710 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 OTUD4Q01804 1114 aaKnown RBP8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 GALNT2Q10471 571 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 SPA17Q15506 151 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 ZIC1Q15915 447 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 SLC18A3Q16572 532 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 TMTC4Q5T4D3 741 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 NCBP2-AS2Q69YL0 99 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 MRPL14Q6P1L8 145 aaKnown RBP8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 LINC00696Q6ZRV3 163 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 B4GALNT4Q76KP1 1039 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 IRF2BP2Q7Z5L9 587 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 CDH24Q86UP0 819 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 DTWD1Q8N5C7 304 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 OR8K5Q8NH50 307 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 CCHCR1Q8TD31 782 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 PPP4R1Q8TF05 950 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 NSMCE1Q8WV22 266 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 FER1L6-AS2Q96M78 137 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 GBP5Q96PP8 586 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 ZSCAN5AQ9BUG6 496 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 RUBCNLQ9H714 662 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 ATP13A2Q9NQ11 1180 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 PARVAQ9NVD7 372 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 CDC23Q9UJX2 597 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 POMT2Q9UKY4 750 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 NEU2Q9Y3R4 380 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 ZNF711Q9Y462 761 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 PCDHA13Q9Y5I0 950 aa8.38□□□□□ -1.07
AC055716.1-201ENST00000550077 TRGV8A0A0C4DH27 118 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 GPR89AB7ZAQ6 455 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 KCNK1O00180 336 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 CCL21O00585 134 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 PEX12O00623 359 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 SOCS6O14544 535 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 GAPDHSO14556 408 aaPredicted RBP8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 PCDH17O14917 1159 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 BUD23O43709 281 aaKnown RBP8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 NADKO95544 446 aaPredicted RBP8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 F10P00742 488 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 GPR89BP0CG08 455 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 PRDX3P30048 256 aaKnown RBP8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 FOLR3P41439 243 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 GABRA4P48169 554 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 ARSEP51690 589 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 DCDC1P59894 354 aa8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 RPL26P61254 145 aaKnown RBP8.37□□□□□ -1.07
AC055716.1-201ENST00000550077 TMPRSS15P98073 1019 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms