RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GSSP48637 474 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 NRG1Q02297 640 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 CYP4F3Q08477 520 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 PTGR1Q14914 329 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 PTPRNQ16849 979 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 C18orf21Q32NC0 220 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 RFTN2Q52LD8 501 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 B3GNT8Q7Z7M8 397 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 OR10Q1Q8NGQ4 319 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 METTL6Q8TCB7 284 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 BRSK1Q8TDC3 778 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 SLC13A3Q8WWT9 602 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 RPL3LQ92901 407 aaKnown RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 NCLNQ969V3 563 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 PKMYT1Q99640 499 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 ACBD6Q9BR61 282 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 ZYG11BQ9C0D3 744 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 RMND5AQ9H871 391 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 PCDHGB1Q9Y5G3 927 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 CXCR6O00574 342 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 CA12O43570 354 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 KATNA1O75449 491 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 NDST3O95803 873 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 CNPP09543 421 aaKnown RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 ODC1P11926 461 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 CYP4B1P13584 511 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 HLA-DPA1P20036 260 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 ACVR2AP27037 513 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 PCYT1AP49585 367 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 LAPTM4AQ15012 233 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 KIAA0040Q15053 153 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 GPSM1Q86YR5 675 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 MSRB3Q8IXL7 192 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 AADATQ8N5Z0 425 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 ARL10Q8N8L6 244 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 OR5K1Q8NHB7 308 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 PSMA8Q8TAA3 256 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 PHF10Q8WUB8 498 aaKnown RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 ZNF566Q969W8 418 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 NSMCE3Q96MG7 304 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 BCL7BQ9BQE9 202 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 TRIT1Q9H3H1 467 aaKnown RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 TMEM45AQ9NWC5 275 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 FNIP2Q9P278 1114 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 TSR3Q9UJK0 312 aaKnown RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 MYADML2A6NDP7 307 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SLC16A6O15403 523 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SEC24AO95486 1093 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 FADS2O95864 444 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 RYKP34925 604 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 PON2Q15165 354 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 NPTX1Q15818 432 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 AP5B1Q2VPB7 878 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 GTDC1Q4AE62 458 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 MS4A13Q5J8X5 152 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 VARS2Q5ST30 1063 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ADHFE1Q8IWW8 467 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 LGI2Q8N0V4 545 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 FBLIM1Q8WUP2 373 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 EEF1AKMT1Q8WVE0 214 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 HTRA1Q92743 480 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 GTF2H4Q92759 462 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 PEX13Q92968 403 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 FATE1Q969F0 183 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 LINGO1Q96FE5 620 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SERPINB11Q96P15 392 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SMIM14Q96QK8 99 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 TMEM248Q9NWD8 314 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 VNN3Q9NY84 501 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SLC25A37Q9NYZ2 338 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SLCO3A1Q9UIG8 710 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SPO11Q9Y5K1 396 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ELOVL7A1L3X0 281 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ARL5CA6NH57 179 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 TNFRSF10BO14763 440 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 NDUFS3O75489 264 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 MT-ND2P03891 347 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 CYP11A1P05108 521 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ACVRL1P37023 503 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 PURAQ00577 322 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SIM2Q14190 667 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 TRIP4Q15650 581 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 UPP1Q16831 310 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 C6orf183Q5T699 404 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 DET1Q7L5Y6 550 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 PAGE2Q7Z2X7 111 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 PHACTR4Q8IZ21 702 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 NKAPQ8N5F7 415 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 ATP6V0D2Q8N8Y2 350 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 TTC16Q8NEE8 873 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 TRIB2Q92519 343 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 EFHD2Q96C19 240 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 BARD1Q99728 777 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 CTRCQ99895 268 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 POLR1EQ9GZS1 481 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SLIRPQ9GZT3 109 aaKnown RBP13.48□□□□□ -0.25
HDAC7-228ENST00000548938 SPATA7Q9P0W8 599 aa13.48□□□□□ -0.25
HDAC7-228ENST00000548938 PNMA8BQ9ULN7 279 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms