RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CAPN3P20807 821 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 CTSCP53634 463 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 HYAL1Q12794 435 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 SP140Q13342 867 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 GRM2Q14416 872 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 RAB30Q15771 203 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 ATP6AP1LQ52LC2 224 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 TTC23LQ6PF05 361 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 BLOC1S3Q6QNY0 202 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 ADGRG6Q86SQ4 1221 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 RNF148Q8N7C7 305 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 HIPK4Q8NE63 616 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 ASZ1Q8WWH4 475 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 PPP2R3CQ969Q6 453 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 CHFRQ96EP1 664 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 TRIM54Q9BYV2 358 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 SLC28A3Q9HAS3 691 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 ANTXRLA6NF34 631 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 TMEM202A6NGA9 273 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 PLK4O00444 970 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 EPB42P16452 691 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 HMOX2P30519 316 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 MSX2P35548 267 aaPredicted RBP20.49■□□□□ 0.87
RITA1-201ENST00000548278 MS4A2Q01362 244 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 ELP6Q0PNE2 266 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 ABRAXAS2Q15018 415 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 VPS26BQ4G0F5 336 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 ROPN1LQ96C74 230 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 NMRK1Q9NWW6 199 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 MAP10Q9P2G4 905 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 CROTQ9UKG9 612 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 CNOT6Q9ULM6 557 aaKnown RBP20.49■□□□□ 0.87
RITA1-201ENST00000548278 COQ6Q9Y2Z9 468 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 CCL27Q9Y4X3 112 aa20.49■□□□□ 0.87
RITA1-201ENST00000548278 C9JVG2 144 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 SYNCRIPO60506 623 aaKnown RBP20.48■□□□□ 0.87
RITA1-201ENST00000548278 SOD1P00441 154 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 EBLN1P0CF75 366 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 ADRB3P13945 408 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 EPORP19235 508 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 IL12RB1P42701 662 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 PIK3CGP48736 1102 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 PDCD4Q53EL6 469 aaKnown RBP20.48■□□□□ 0.87
RITA1-201ENST00000548278 LAYNQ6UX15 382 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 RNF111Q6ZNA4 994 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 TCAIMQ8N3R3 496 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 UCMAQ8WVF2 138 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 SLC45A3Q96JT2 553 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 TEX37Q96LM6 180 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 MYADMQ96S97 322 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 HBEGFQ99075 208 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 C1orf50Q9BV19 199 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 SLC32A1Q9H598 525 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 ADA2Q9NZK5 511 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 THAP10Q9P2Z0 257 aaPredicted RBP20.48■□□□□ 0.87
RITA1-201ENST00000548278 TRPS1Q9UHF7 1281 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 NDUFAF1Q9Y375 327 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 REV3LO60673 3130 aa20.48■□□□□ 0.87
RITA1-201ENST00000548278 LOC730098B7Z3J9 87 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 TRIM38O00635 465 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 LSM1O15116 133 aaKnown RBP20.47■□□□□ 0.87
RITA1-201ENST00000548278 TSPAN6O43657 245 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 BAG2O95816 211 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 ZFP36L2P47974 494 aaKnown RBP20.47■□□□□ 0.87
RITA1-201ENST00000548278 PRLHRP49683 370 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 TMEM115Q12893 351 aaPredicted RBP20.47■□□□□ 0.87
RITA1-201ENST00000548278 FLOT2Q14254 428 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 RNF165Q6ZSG1 346 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 DENND4AQ7Z401 1863 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 FNDC5Q8NAU1 212 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 PCYOX1LQ8NBM8 494 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 TSPEARQ8WU66 669 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 PPP1R16AQ96I34 528 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 ZNF570Q96NI8 536 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 P2RY13Q9BPV8 354 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 SPAG4Q9NPE6 437 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 RNF11Q9Y3C5 154 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 ACOT8O14734 319 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 INPP4BO15327 924 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 NVLO15381 856 aaKnown RBP20.47■□□□□ 0.87
RITA1-201ENST00000548278 RECQL5O94762 991 aaPredicted RBP20.47■□□□□ 0.87
RITA1-201ENST00000548278 HIST1H2AGP0C0S8 130 aaPredicted RBP20.47■□□□□ 0.87
RITA1-201ENST00000548278 HIST1H2ADP20671 130 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 HNMTP50135 292 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 TLDC1Q6P9B6 456 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 LRRC70Q7Z2Q7 622 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 SUSD6Q92537 303 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 HIST1H2AHQ96KK5 128 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 HIST1H2AJQ99878 128 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 H2AFJQ9BTM1 129 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 ZDHHC4Q9NPG8 344 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 HEBP1Q9NRV9 189 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 TMEM181Q9P2C4 612 aa20.47■□□□□ 0.87
RITA1-201ENST00000548278 H3BNX3 289 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 BCAS2O75934 225 aaPredicted RBP20.46■□□□□ 0.87
RITA1-201ENST00000548278 WDR47O94967 919 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 KAT7O95251 611 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 CYP2A7P20853 494 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 SLC6A12P48065 614 aa20.46■□□□□ 0.87
RITA1-201ENST00000548278 UFM1P61960 85 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms