RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 GPRC6AQ5T6X5 926 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 PTRHD1Q6GMV3 140 aaKnown RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 SLC30A9Q6PML9 568 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 DET1Q7L5Y6 550 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 CHST15Q7LFX5 561 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 PIM3Q86V86 326 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 GALNT13Q8IUC8 556 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 FSTL5Q8N475 847 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 CCDC63Q8NA47 563 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 VPS35Q96QK1 796 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 NLGN3Q9NZ94 848 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 MED16Q9Y2X0 877 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 CSNK1G3Q9Y6M4 447 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 COL5A1P20908 1838 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 SPEGQ15772 3267 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 NEMP2A6NFY4 417 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 B4DGG1 531 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 NIPSNAP2O75323 286 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 APOA4P06727 396 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 CCDC166P0CW27 439 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 ALPPL2P10696 532 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 ACP5P13686 325 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 AKT1P31749 480 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 SKIV2L2P42285 1042 aaKnown RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 KPNA2P52292 529 aaKnown RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 DLG1Q12959 904 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 TERF2Q15554 542 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 PDK4Q16654 411 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 FAM83EQ2M2I3 478 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 PROX2Q3B8N5 592 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 UGT3A1Q6NUS8 523 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 TMEM207Q6UWW9 146 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 KCNJ9Q92806 393 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 NXNL1Q96CM4 212 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 SCARF2Q96GP6 870 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-227ENST00000548080 APOLD1Q96LR9 279 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 GPR78Q96P69 363 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 GPR21Q99679 349 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 NMRAL1Q9HBL8 299 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 SYTL2Q9HCH5 934 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 TRIM39Q9HCM9 518 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 IGSF5Q9NSI5 407 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 GULP1Q9UBP9 304 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 GPR34Q9UPC5 381 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 KCNK6Q9Y257 313 aa17.05■□□□□ 0.32
HDAC7-227ENST00000548080 LY6G6EA0A0G2JKS1 128 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 WDR91A4D1P6 747 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 GMNCA6NCL1 334 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 E5RI56 91 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 BIRC5O15392 142 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 GRID2O43424 1007 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 NUAK1O60285 661 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 CDK14O94921 469 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 LTA4HP09960 611 aaKnown RBP17.04■□□□□ 0.32
HDAC7-227ENST00000548080 FTH1P19P0C7X4 201 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 CHRM3P20309 590 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 ACTR1BP42025 376 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 CTSCP53634 463 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 ACTR1AP61163 376 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 DAB2P98082 770 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 TMEM115Q12893 351 aaPredicted RBP17.04■□□□□ 0.32
HDAC7-227ENST00000548080 CSHL1Q14406 222 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 AGAP9Q5VTM2 703 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 SLCO6A1Q86UG4 719 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 GKN2Q86XP6 184 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 SLC35F3Q8IY50 421 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 SPATA6LQ8N4H0 392 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 KYQ8NBH2 561 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 FAM46DQ8NEK8 389 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 HEXDCQ8WVB3 486 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 DCUN1D1Q96GG9 259 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 SCYL1Q96KG9 808 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 UBXN10Q96LJ8 280 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 CDC6Q99741 560 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 EPN3Q9H201 632 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 SPATS2LQ9NUQ6 558 aaKnown RBP17.04■□□□□ 0.32
HDAC7-227ENST00000548080 TOR4AQ9NXH8 423 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 TRMT6Q9UJA5 497 aaKnown RBP17.04■□□□□ 0.32
HDAC7-227ENST00000548080 PRSS21Q9Y6M0 314 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 U3KQA8 63 aa17.04■□□□□ 0.32
HDAC7-227ENST00000548080 OR2AG2A6NM03 316 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 TNFSF14O43557 240 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 BPGMP07738 259 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 ZNF37AP17032 561 aaPredicted RBP17.03■□□□□ 0.32
HDAC7-227ENST00000548080 SEC24CP53992 1094 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 CLDN6P56747 220 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 B4GALNT1Q00973 533 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 ILF3Q12906 894 aaKnown RBP eCLIP17.03■□□□□ 0.32
HDAC7-227ENST00000548080 LDLRAP1Q5SW96 308 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 TRAPPC5Q8IUR0 188 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 NUDCD3Q8IVD9 361 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 CLDN19Q8N6F1 224 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 RASGEF1AQ8N9B8 481 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 DDHD1Q8NEL9 900 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 GPBAR1Q8TDU6 330 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 ANKRD49Q8WVL7 239 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 PATE1Q8WXA2 126 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 FAM136AQ96C01 138 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 TAAR2Q9P1P5 351 aa17.03■□□□□ 0.32
HDAC7-227ENST00000548080 GALPQ9UBC7 116 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms