RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 AGAP14A8MT82 685 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 MIF4GDA9UHW6 222 aaKnown RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 FURINP09958 794 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 PRSS56P0CW18 603 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 CSRP3P50461 194 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF140P52738 457 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 GDF10P55107 478 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 ACY1Q03154 408 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 DHX9Q08211 1270 aaKnown RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 PRKAA1Q13131 559 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 PRKG2Q13237 762 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 POU6F1Q14863 301 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 BRD3Q15059 726 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 GPR19Q15760 415 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SKIDA1Q1XH10 827 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 GPR33Q49SQ1 333 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 BCL7AQ4VC05 210 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 COLEC12Q5KU26 742 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 TMTC4Q5T4D3 741 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 CAPRIN2Q6IMN6 1127 aaKnown RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 CYB5D1Q6P9G0 228 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF449Q6P9G9 518 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 FAM199XQ6PEV8 388 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 TMEM135Q86UB9 458 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SERPINA9Q86WD7 417 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 OOSP2Q86WS3 158 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SYCE1Q8N0S2 351 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 CLDN19Q8N6F1 224 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 C9orf43Q8TAL5 461 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 LCN9Q8WX39 176 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 ULK4Q96C45 1275 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 ABHD17AQ96GS6 310 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 CDKN2AIPNLQ96HQ2 116 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SLC41A2Q96JW4 573 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 LINC00615Q96LM1 132 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 RMDN2Q96LZ7 410 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 PPM1MQ96MI6 270 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 NRTNQ99748 197 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 TMEM121Q9BTD3 319 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 TWSG1Q9GZX9 223 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 KLHL25Q9H0H3 589 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SRMSQ9H3Y6 488 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 KIR3DX1Q9H7L2 352 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 AKIRIN1Q9H9L7 192 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 ARNT2Q9HBZ2 717 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 LHX9Q9NQ69 397 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 KCND1Q9NSA2 647 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SOHLH2Q9NX45 425 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 ZDHHC3Q9NYG2 299 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SMARCAL1Q9NZC9 954 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SEMA5BQ9P283 1151 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 FEZ2Q9UHY8 353 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-211ENST00000547950 KCND3Q9UK17 655 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 HEBP2Q9Y5Z4 205 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 KIF26BQ2KJY2 2108 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 UNC13CQ8NB66 2214 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 ATMQ13315 3056 aa6.53□□□□□ -1.36
SCAF11-211ENST00000547950 SHROOM3Q8TF72 1996 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 C17orf113A0A1B0GUU1 675 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TLCD2A6NGC4 264 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 OR51F1A6NGY5 319 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 IFRD1O00458 451 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-211ENST00000547950 PSMD3O43242 534 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 CREG1O75629 220 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 SCRG1O75711 98 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF189O75820 626 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-211ENST00000547950 ZBTB11O95625 1053 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-211ENST00000547950 IFNB1P01574 187 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 MT-ND3P03897 115 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 CDH3P22223 829 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 NDUFS1P28331 727 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 PDHA2P29803 388 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 PRDX3P30048 256 aaKnown RBP6.52□□□□□ -1.37
SCAF11-211ENST00000547950 PREPP48147 710 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 LMAN1P49257 510 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 PRLHRP49683 370 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 KPNA2P52292 529 aaKnown RBP6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TUBB4BP68371 445 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TLE1Q04724 770 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 CACNG1Q06432 222 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 SNX1Q13596 522 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 DNASE1L3Q13609 305 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TUBB2AQ13885 445 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 CCDC38Q502W7 563 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 PRAMEF17Q5VTA0 474 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 KCTD11Q693B1 232 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 NAPRTQ6XQN6 538 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 KMT5CQ86Y97 462 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TMEM126BQ8IUX1 230 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TMEM139Q8IV31 216 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 PIANPQ8IYJ0 282 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 TXLNBQ8N3L3 684 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 DNAAF3Q8N9W5 541 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 ACVR1CQ8NER5 493 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 OR52K1Q8NGK4 314 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 HM13Q8TCT9 377 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 CT55Q8WUE5 264 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 STYXQ8WUJ0 223 aa6.52□□□□□ -1.37
SCAF11-211ENST00000547950 HEXDCQ8WVB3 486 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms