RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 SRPK3Q9UPE1 567 aa8.86□□□□□ -0.99
AC055716.3-201ENST00000547533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.86□□□□□ -0.99
AC055716.3-201ENST00000547533 CCDC88CQ9P219 2028 aa8.86□□□□□ -0.99
AC055716.3-201ENST00000547533 C17orf113A0A1B0GUU1 675 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 F8W8V4 182 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 ZNF749O43361 778 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 LDB2O43679 373 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 SPOPO43791 374 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 OR2B3O76000 313 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 ANXA9O76027 345 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 SRP72O76094 671 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 STK10O94804 968 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 CBX6O95503 412 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 LDLRP01130 860 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 GSTM1P09488 218 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 PIM1P11309 404 aaPredicted RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 TNNT1P13805 278 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 NFKB1P19838 968 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 PRDX3P30048 256 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 ARCN1P48444 511 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 CD151P48509 253 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 GEMP55040 296 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 DCDP81605 110 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 GSTM4Q03013 218 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 MYBPC3Q14896 1274 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 PRKD1Q15139 912 aaPredicted RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 PTCHD3Q3KNS1 767 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 PLEKHN1Q494U1 663 aaPredicted RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 PRR30Q53SZ7 412 aaPredicted RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 DUS1LQ6P1R4 473 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 FAM198BQ6UWH4 519 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 DAAM2Q86T65 1068 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 AMIGO1Q86WK6 493 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 Q8NA96 180 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 SLC38A9Q8NBW4 561 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 OR1L3Q8NH93 324 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 SLC35G2Q8TBE7 412 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 NACC2Q96BF6 587 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 RNF25Q96BH1 459 aaPredicted RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 TCTN2Q96GX1 697 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 LINC00615Q96LM1 132 aaPredicted RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 FCRL5Q96RD9 977 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 COPS8Q99627 209 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 TFB2MQ9H5Q4 396 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 MVB12BQ9H7P6 319 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 ATP13A2Q9NQ11 1180 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 PCMTD2Q9NV79 361 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 ASF1BQ9NVP2 202 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 TMPRSS11EQ9UL52 423 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 AAR2Q9Y312 384 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 PTRH2Q9Y3E5 179 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 ANKRD12Q6UB98 2062 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 DIDO1Q9BTC0 2240 aaKnown RBP8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 CRYBG3Q68DQ2 2970 aa8.85□□□□□ -0.99
AC055716.3-201ENST00000547533 CCDC66A2RUB6 948 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 C5orf60A6NFR6 353 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 WIPF3A6NGB9 483 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 HACD1B0YJ81 288 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 HNRNPRO43390 633 aaKnown RBP8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 KRT86O43790 486 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 ZNF189O75820 626 aaPredicted RBP8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 ATP1B2P14415 290 aaPredicted RBP8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 ITGAXP20702 1163 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 ELAVL4P26378 380 aaKnown RBP8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 SHMT2P34897 504 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 LMAN1P49257 510 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 FANCCQ00597 558 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 ABRQ12979 859 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 AIMP2Q13155 320 aaKnown RBP8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 RPA4Q13156 261 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 TRIM14Q14142 442 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 PCM1Q15154 2024 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 TAF1AQ15573 450 aaPredicted RBP8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 DCAF10Q5QP82 559 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 CCDC181Q5TID7 509 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 KAZNQ674X7 775 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 TLDC1Q6P9B6 456 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 IGFL3Q6UXB1 125 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 NPNTQ6UXI9 565 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 MRGPREQ86SM8 312 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 ZC3H18Q86VM9 953 aaKnown RBP8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 CCDC50Q8IVM0 306 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 ST6GALNAC3Q8NDV1 305 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 OR4K2Q8NGD2 314 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 UBE2Q2Q8WVN8 375 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 DLG3Q92796 817 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 PTERQ96BW5 349 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 C19orf60Q96EN9 201 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 RMDN2Q96LZ7 410 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 CCDC42Q96M95 316 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 ALS2CR12Q96Q35 445 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 PHF12Q96QT6 1004 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 NDC1Q9BTX1 674 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 PITPNM3Q9BZ71 974 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 POLG2Q9UHN1 485 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 NBPF19A0A087WUL8 3843 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 FER1L5A0AVI2 2057 aa8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 MDC1Q14676 2089 aaKnown RBP8.84□□□□□ -0.99
AC055716.3-201ENST00000547533 CELSR2Q9HCU4 2923 aa8.83□□□□□ -1
AC055716.3-201ENST00000547533 C3orf70A6NLC5 250 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms