RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 LEPRP48357 1165 aaKnown RBP10.64□□□□□ -0.71
GCN1-202ENST00000547263 TERF1P54274 439 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 MC2RQ01718 297 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 GRB7Q14451 532 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 LONRF1Q17RB8 773 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 DNAJC21Q5F1R6 531 aaKnown RBP10.64□□□□□ -0.71
GCN1-202ENST00000547263 SPANXN3Q5MJ09 141 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 PLEKHS1Q5SXH7 462 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 PHF19Q5T6S3 580 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 ZNF549Q6P9A3 640 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 MAATS1Q7Z4T9 603 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 SDCCAG8Q86SQ7 713 aaPredicted RBP10.64□□□□□ -0.71
GCN1-202ENST00000547263 DTX1Q86Y01 620 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 DENND6AQ8IWF6 608 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 PDIK1LQ8N165 341 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.64□□□□□ -0.71
GCN1-202ENST00000547263 C2CD4AQ8NCU7 369 aaPredicted RBP10.64□□□□□ -0.71
GCN1-202ENST00000547263 BBOF1Q8ND07 529 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 RCBTB1Q8NDN9 531 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 OR5K2Q8NHB8 316 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 FLVCR1-AS1Q8TAF5 88 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 ASZ1Q8WWH4 475 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 NCSTNQ92542 709 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 ELMO1Q92556 727 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 TFGQ92734 400 aaPredicted RBP10.64□□□□□ -0.71
GCN1-202ENST00000547263 AHCYL2Q96HN2 611 aaKnown RBP10.64□□□□□ -0.71
GCN1-202ENST00000547263 C16orf45Q96MC5 204 aaPredicted RBP10.64□□□□□ -0.71
GCN1-202ENST00000547263 DDA1Q9BW61 102 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 TSSK1BQ9BXA7 367 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 FBXO8Q9NRD0 319 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 IL1RAPL1Q9NZN1 696 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 GNPTGQ9UJJ9 305 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 VPS9D1Q9Y2B5 631 aa10.64□□□□□ -0.71
GCN1-202ENST00000547263 ZZEF1O43149 2961 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 PKD1L2Q7Z442 2459 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 MATN2O00339 956 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 IFRD1O00458 451 aaPredicted RBP10.63□□□□□ -0.71
GCN1-202ENST00000547263 EIF3HO15372 352 aaKnown RBP eCLIP10.63□□□□□ -0.711e-6■■■□□ 17.6
GCN1-202ENST00000547263 NDUFS3O75489 264 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 BANF1O75531 89 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 MATN4O95460 622 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 MSL3P1P0C860 447 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 PKMP14618 531 aaKnown RBP10.63□□□□□ -0.71
GCN1-202ENST00000547263 TYRP1P17643 537 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 GABRB3P28472 473 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 RBMS1P29558 406 aaKnown RBP10.63□□□□□ -0.71
GCN1-202ENST00000547263 ELK3P41970 407 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 CLCN7P51798 805 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 PCBP4P57723 403 aaKnown RBP10.63□□□□□ -0.71
GCN1-202ENST00000547263 PPP1CAP62136 330 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 TIAL1Q01085 375 aaKnown RBP eCLIP10.63□□□□□ -0.71
GCN1-202ENST00000547263 C2orf54Q08AI8 447 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 HIF1AQ16665 826 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 WHAMMP3Q1A5X7 153 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 ZNF470Q6ECI4 717 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 CASC4Q6P4E1 433 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 ZNF449Q6P9G9 518 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 KLHL35Q6PF15 583 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 UNC5DQ6UXZ4 953 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 UNC5AQ6ZN44 842 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 KIAA0408Q6ZU52 694 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 KMT5CQ86Y97 462 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 ADGRF3Q8IZF5 1079 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 UNC5BQ8IZJ1 945 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 KRT222Q8N1A0 295 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 ZNF248Q8NDW4 579 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 OR52E1Q8NGJ3 308 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 CALML6Q8TD86 181 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 SNRNP27Q8WVK2 155 aaKnown RBP10.63□□□□□ -0.71
GCN1-202ENST00000547263 UBXN4Q92575 508 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 KCNJ9Q92806 393 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 CERS2Q96G23 380 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 PWWP2AQ96N64 755 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 FAM167BQ9BTA0 163 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 MCMBPQ9BTE3 642 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 PITPNM3Q9BZ71 974 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 OCIAD1Q9NX40 245 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 MOCS1Q9NZB8 636 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 FBXO5Q9UKT4 447 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 POMT2Q9UKY4 750 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 ICKQ9UPZ9 632 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 MRFAP1Q9Y605 127 aa10.63□□□□□ -0.71
GCN1-202ENST00000547263 ANKRD11Q6UB99 2663 aaPredicted RBP10.63□□□□□ -0.71
GCN1-202ENST00000547263 SNRNP200O75643 2136 aaKnown RBP10.63□□□□□ -0.71
GCN1-202ENST00000547263 AHCTF1Q8WYP5 2266 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 TLCD2A6NGC4 264 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 KIF2AO00139 706 aaPredicted RBP10.62□□□□□ -0.71
GCN1-202ENST00000547263 BTN3A3O00478 584 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 PFDN6O15212 129 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 NIPSNAP2O75323 286 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 C1QAP02745 245 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 APOA4P06727 396 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 JMJD7P0C870 316 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 ERGP11308 486 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 AMD1P17707 334 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 NELFEP18615 380 aaKnown RBP10.62□□□□□ -0.71
GCN1-202ENST00000547263 MPSTP25325 297 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 SLC5A2P31639 672 aa10.62□□□□□ -0.71
GCN1-202ENST00000547263 CSTF2P33240 577 aaKnown RBP eCLIP10.62□□□□□ -0.71
GCN1-202ENST00000547263 KPNA2P52292 529 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms