RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PDHA2P29803 388 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 CTSKP43235 329 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 AP1S2P56377 157 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 IL9RQ01113 521 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 MPP2Q14168 576 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 TSNQ15631 228 aaKnown RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 UAP1L1Q3KQV9 507 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 PRRT3Q5FWE3 981 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 C16orf46Q6P387 395 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 LAYNQ6UX15 382 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 UBE2R2Q712K3 238 aaPredicted RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 TAF8Q7Z7C8 310 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 GKN2Q86XP6 184 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 GPSM1Q86YR5 675 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 LILRA3Q8N6C8 439 aaPredicted RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 FBXO15Q8NCQ5 510 aaPredicted RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 ARMC2Q8NEN0 867 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 LRFN3Q9BTN0 628 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 SLC12A9Q9BXP2 914 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 RDH14Q9HBH5 336 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 PARVBQ9HBI1 364 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 TMEM74BQ9NUR3 256 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 INTS9Q9NV88 658 aaKnown RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 OGFRQ9NZT2 677 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 EMCNQ9ULC0 261 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 PNMA8BQ9ULN7 279 aaPredicted RBP15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 OARD1Q9Y530 152 aa15.48■□□□□ 0.07
TRAFD1-203ENST00000547063 VCANP13611 3396 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 OR5K4A6NMS3 321 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 CDC7O00311 574 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 BIRC5O15392 142 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 KDM1AO60341 852 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 EPN2O95208 641 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 CFIP05156 583 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 SYPP08247 313 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 DHRS4L1P0CG22 281 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 CHN1P15882 459 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 ACADLP28330 430 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 NDUFS1P28331 727 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 GMPRP36959 345 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 ETV4P43268 484 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 PRKAA2P54646 552 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 CDKL1Q00532 357 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 ABRQ12979 859 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 LAIR1Q6GTX8 287 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 CAPRIN2Q6IMN6 1127 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 ABRAXAS1Q6UWZ7 409 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 SLC22A9Q8IVM8 553 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 TRIM42Q8IWZ5 723 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 AVL9Q8NBF6 648 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 DYDC1Q8WWB3 177 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 TFGQ92734 400 aaPredicted RBP15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 PTERQ96BW5 349 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 ATOH8Q96SQ7 321 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 UNKQ9C0B0 810 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 WWP1Q9H0M0 922 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 NUDT4Q9NZJ9 180 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 CPSF2Q9P2I0 782 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 COPG2Q9UBF2 871 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 KLF15Q9UIH9 416 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 TSR3Q9UJK0 312 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 SLC6A14Q9UN76 642 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 DOLKQ9UPQ8 538 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 ASF1AQ9Y294 204 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 PLEKHM1Q9Y4G2 1056 aa15.47■□□□□ 0.07
TRAFD1-203ENST00000547063 TP53BP1Q12888 1972 aaPredicted RBP15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 TARM1B6A8C7 271 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 TK2O00142 265 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 SNX2O60749 519 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 F3P13726 295 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 ATP5F1P24539 256 aaPredicted RBP15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 AK4P27144 223 aaPredicted RBP15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 RPL10P27635 214 aaKnown RBP15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 RXRGP48443 463 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 SERPINB4P48594 390 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 RPIAP49247 311 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 ATP1A2P50993 1020 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 NAA20P61599 178 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 IRX4P78413 519 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 TGFBIQ15582 683 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 OR4D1Q15615 310 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 KIF19Q2TAC6 998 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 TUBB8Q3ZCM7 444 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 ZNF542PQ5EBM4 170 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 SLC23A3Q6PIS1 610 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 SLC30A9Q6PML9 568 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 SBSNQ6UWP8 590 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 XKR5Q6UX68 686 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 ZYG11AQ6WRX3 759 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 RAB44Q7Z6P3 723 aaPredicted RBP15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 RASGRP3Q8IV61 690 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 TBC1D21Q8IYX1 336 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 PHC3Q8NDX5 983 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 CFAP61Q8NHU2 1237 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 MGARPQ8TDB4 240 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 C12orf66Q96MD2 445 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 ELF4Q99607 663 aaPredicted RBP15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 PAIP2Q9BPZ3 127 aaKnown RBP15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 LRRC61Q9BV99 259 aa15.46■□□□□ 0.07
TRAFD1-203ENST00000547063 NUSAP1Q9BXS6 441 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms