RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TBC1D10AQ9BXI6 508 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 TXLNGYQ9BZA5 131 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 RHOJQ9H4E5 214 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 KIR3DX1Q9H7L2 352 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 AKAP13Q12802 2813 aa19.97■□□□□ 0.79
HMGA2-211ENST00000545998 ACSL3O95573 720 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 NDUFS1P28331 727 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 CD1CP29017 333 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 CLDN6P56747 220 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 GPLD1P80108 840 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 NAB1Q13506 487 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 ACSBG2Q5FVE4 666 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 HES3Q5TGS1 186 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 HECTD2Q5U5R9 776 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 CCNI2Q6ZMN8 369 aaPredicted RBP19.96■□□□□ 0.79
HMGA2-211ENST00000545998 SPNS2Q8IVW8 549 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 CTAGE3PQ8IX95 158 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 CHCHD4Q8N4Q1 142 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 GPATCH11Q8N954 259 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 PHC3Q8NDX5 983 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 INPP5DQ92835 1189 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 FERD3LQ96RJ6 166 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 MVB12BQ9H7P6 319 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 TAS2R13Q9NYV9 303 aa19.96■□□□□ 0.79
HMGA2-211ENST00000545998 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.96■□□□□ 0.79
HMGA2-211ENST00000545998 V9GYY5 206 aaPredicted RBP19.96■□□□□ 0.79
HMGA2-211ENST00000545998 TCEA3O75764 348 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 GP5P40197 560 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 ILF2Q12905 390 aaKnown RBP19.95■□□□□ 0.78
HMGA2-211ENST00000545998 SQSTM1Q13501 440 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 KRT33BQ14525 404 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 EFTUD2Q15029 972 aaKnown RBP eCLIP19.95■□□□□ 0.786e-8■□□□□ 10.7
HMGA2-211ENST00000545998 TTLL9Q3SXZ7 439 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 AMZ1Q400G9 498 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 NKAIN2Q5VXU1 208 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 FAM45BPQ6NSW5 357 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 UGT3A1Q6NUS8 523 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 ERMP1Q7Z2K6 904 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 PIM3Q86V86 326 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 PPM1NQ8N819 430 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 ACVR1CQ8NER5 493 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 OR5AR1Q8NGP9 310 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 FAM45AQ8TCE6 357 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.95■□□□□ 0.781e-7■■□□□ 11.4
HMGA2-211ENST00000545998 UBXN4Q92575 508 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 GFM1Q96RP9 751 aaKnown RBP19.95■□□□□ 0.78
HMGA2-211ENST00000545998 ACSS3Q9H6R3 686 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 TXNDC16Q9P2K2 825 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 SLC24A2Q9UI40 661 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 WASF3Q9UPY6 502 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 ASF1AQ9Y294 204 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 VWA7Q9Y334 891 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 ADRB1P08588 477 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 FDXRP22570 491 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 SKIV2L2P42285 1042 aaKnown RBP19.95■□□□□ 0.78
HMGA2-211ENST00000545998 VSNL1P62760 191 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 FOXC1Q12948 553 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 ABRQ12979 859 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 SPIDRQ14159 915 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 TRMT10CQ7L0Y3 403 aaKnown RBP19.95■□□□□ 0.78
HMGA2-211ENST00000545998 TMPRSS7Q7RTY8 843 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 TMPRSS12Q86WS5 348 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 TBC1D21Q8IYX1 336 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 OR10G6Q8NH81 332 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 OR5K2Q8NHB8 316 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 VPS39Q96JC1 886 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 CYTH2Q99418 400 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 RBBP8Q99708 897 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 OLFM1Q99784 485 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 EPB41L1Q9H4G0 881 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 SYNDIG1Q9H7V2 258 aa19.95■□□□□ 0.78
HMGA2-211ENST00000545998 TRMT6Q9UJA5 497 aaKnown RBP19.95■□□□□ 0.78
HMGA2-211ENST00000545998 ATXN7L1Q9ULK2 861 aaPredicted RBP19.95■□□□□ 0.78
HMGA2-211ENST00000545998 FAM95CA0A1B0GW59 222 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 D6RAR5 112 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 HYAL3O43820 417 aaPredicted RBP19.94■□□□□ 0.78
HMGA2-211ENST00000545998 TOP3BO95985 862 aaKnown RBP19.94■□□□□ 0.78
HMGA2-211ENST00000545998 MT-CO3P00414 261 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 PMS2P54278 862 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 CFHR1Q03591 330 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 CLPPQ16740 277 aaPredicted RBP19.94■□□□□ 0.78
HMGA2-211ENST00000545998 ERCC6LQ2NKX8 1250 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 KLHL38Q2WGJ6 581 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 UNC5DQ6UXZ4 953 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 RBM44Q6ZP01 1051 aaKnown RBP19.94■□□□□ 0.78
HMGA2-211ENST00000545998 TMPRSS9Q7Z410 1059 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 CACTIN-AS1Q8N1I8 211 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 GALNT15Q8N3T1 639 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 DCBLD1Q8N8Z6 715 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 AHCYL2Q96HN2 611 aaKnown RBP19.94■□□□□ 0.78
HMGA2-211ENST00000545998 ELMO2Q96JJ3 720 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 TRIT1Q9H3H1 467 aaKnown RBP19.94■□□□□ 0.78
HMGA2-211ENST00000545998 OGFRQ9NZT2 677 aa19.94■□□□□ 0.78
HMGA2-211ENST00000545998 DUX1O43812 170 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 FAM155BO75949 473 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 UBXN7O94888 489 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 MATN4O95460 622 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 CPNE6O95741 557 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 CBSLP0DN79 551 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 MCM3P25205 808 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms