RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PIKFYVEQ9Y2I7 2098 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 TRBV5-3A0A0A0MS03 114 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 CCL15-CCL14A0A0B4J2E2 113 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 OR7A17O14581 309 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 RGS14O43566 566 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 XYLBO75191 536 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 E2F6O75461 281 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 WDR47O94967 919 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 ANGPTL1O95841 491 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 POMCP01189 267 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 S100BP04271 92 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 AGXTP21549 392 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 LPOP22079 712 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 IST1P53990 364 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 EMX1Q04741 257 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 EFEMP1Q12805 493 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 TRAF3Q13114 568 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 CDK5R2Q13319 367 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 GTF2H2Q13888 395 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 NFE2Q16621 373 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 MAPKAPK3Q16644 382 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 CCL15Q16663 113 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 RUNDC3AQ59EK9 446 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 LDLRAP1Q5SW96 308 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 PRAMEF19Q5SWL8 479 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 SYT6Q5T7P8 510 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 CAPN13Q6MZZ7 669 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 GTF2H2CQ6P1K8 395 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 SHQ1Q6PI26 577 aaKnown RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 PLEKHG7Q6ZR37 379 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 DCP2Q8IU60 420 aaKnown RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 STK40Q8N2I9 435 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 OR4F6Q8NGB9 312 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 OR10A6Q8NH74 314 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 HASPINQ8TF76 798 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 EEF1AKMT1Q8WVE0 214 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 YIPF6Q96EC8 236 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 PARK7Q99497 189 aaKnown RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 THUMPD3Q9BV44 507 aaKnown RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 DUSP21Q9H596 190 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 ATP13A3Q9H7F0 1226 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 RMND5AQ9H871 391 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 CCNB1IP1Q9NPC3 277 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 SCHIP1Q9P0W5 487 aaPredicted RBP8.6□□□□□ -1.03
TDP1-204ENST00000545686 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
TDP1-204ENST00000545686 H7C0S8 307 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 SLC28A1O00337 649 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 KDM1AO60341 852 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PRKD3O94806 890 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PCSK2P16519 638 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 HOXD9P28356 352 aaPredicted RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 HOXD12P35452 270 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PTGER3P43115 390 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MAGEA2P43356 314 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MAGEA11P43364 429 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 BEX3Q00994 111 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PON2Q15165 354 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 C5orf22Q49AR2 442 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 SLC39A12Q504Y0 691 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 METTL2BQ6P1Q9 378 aaKnown RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 USP50Q70EL3 339 aaPredicted RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 PIWIL3Q7Z3Z3 882 aaKnown RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 BTLAQ7Z6A9 289 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 P2RY8Q86VZ1 359 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 CALHM3Q86XJ0 350 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PLPP6Q8IY26 295 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 LGI2Q8N0V4 545 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 OR6Q1Q8NGQ2 317 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 DYNC2LI1Q8TCX1 351 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MCOLN3Q8TDD5 553 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 ZFP90Q8TF47 636 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 CDK15Q96Q40 435 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 ZNF300Q96RE9 604 aaPredicted RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 MAGEH1Q9H213 219 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 CLMPQ9H6B4 373 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.59□□□□□ -1.03
TDP1-204ENST00000545686 ABI2Q9NYB9 513 aaPredicted RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 KIAA1522Q9P206 1035 aaPredicted RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 E5RI56 91 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 RAD51BO15315 384 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 INPPL1O15357 1258 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 INSIG1O15503 277 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 ERN1O75460 977 aaKnown RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 CREG1O75629 220 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 GLUD1P00367 558 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 CR2P20023 1033 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MC4RP32245 332 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 HNRNPFP52597 415 aaKnown RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 HUNKP57058 714 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 RPL38P63173 70 aaKnown RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 SLC35A2P78381 396 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 PIGFQ07326 219 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MGAT3Q09327 533 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 MAP2K5Q13163 448 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 ABRAXAS2Q15018 415 aa8.59□□□□□ -1.03
TDP1-204ENST00000545686 HIST2H2ACQ16777 129 aaPredicted RBP8.59□□□□□ -1.03
TDP1-204ENST00000545686 ADPRMQ3LIE5 342 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms