RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 WNT9AO14904 365 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 C1QTNF8P60827 252 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 DCST1Q5T197 706 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 TNFAIP8L2Q6P589 184 aaPredicted RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 THAP5Q7Z6K1 395 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 SLC13A3Q8WWT9 602 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 RIPOR3Q96MK2 946 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 PCDHAC1Q9H158 963 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 SMPD3Q9NY59 655 aaPredicted RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 CPSF4LA6NMK7 179 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 TMEM233B4DJY2 109 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 CLDN4O14493 209 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 F2P00734 622 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 PRPS2P11908 318 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 MLLT6P55198 1093 aaPredicted RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 FPGSQ05932 587 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 HEPACAMQ14CZ8 416 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 FAM91A1Q658Y4 838 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 SLC38A3Q99624 504 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 SMG9Q9H0W8 520 aaKnown RBP12.6□□□□□ -0.39
CHD4-211ENST00000544484 TAS2R1Q9NYW7 299 aa12.6□□□□□ -0.39
CHD4-211ENST00000544484 HAT1O14929 419 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 CLDN7O95471 211 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 ACTR1BP42025 376 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 ACTR1AP61163 376 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 XIAPP98170 497 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 GRSF1Q12849 480 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHD4-211ENST00000544484 CLDN19Q8N6F1 224 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 MCUBQ9NWR8 336 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 ILVBLA1L0T0 632 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 GDI1P31150 447 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 PRMT2P55345 433 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 NUS1Q96E22 293 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 C11orf49Q9H6J7 331 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 RPRD1BQ9NQG5 326 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 FADS2P1A8MWK0 482 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 CNTN5O94779 1100 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 ANGPTL1O95841 491 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 SERPINA1P01009 418 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 TGFB1P01137 390 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 KCNE1P15382 129 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 ZNF8P17098 575 aaPredicted RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 OMPP47874 163 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 DENND5AQ6IQ26 1287 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 ZNF598Q86UK7 904 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 TFB2MQ9H5Q4 396 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 MRTO4Q9UKD2 239 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 POMPQ9Y244 141 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 ASB3Q9Y575 518 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 CXCR6O00574 342 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 HCN1O60741 890 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 AHSGP02765 367 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 RBM20Q5T481 1227 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 NEK5Q6P3R8 708 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 SLCO6A1Q86UG4 719 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 METTL21AQ8WXB1 218 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 CDADC1Q9BWV3 514 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 PRRG4Q9BZD6 226 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 TRIM8Q9BZR9 551 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 PGRMC2O15173 223 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 PSIP1O75475 530 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 ECI2O75521 394 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 CAPGP40121 348 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 STAT5AP42229 794 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 NFKB2Q00653 900 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 OR10H5Q8NGA6 315 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 HMGB4Q8WW32 186 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 POP5Q969H6 163 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 ABCB9Q9NP78 766 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 COMMD3-BMI1R4GMX3 469 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 PI15O43692 258 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 PLOD3O60568 738 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 KERAO60938 352 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 KHDRBS3O75525 346 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 STATHP02808 62 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 GGT5P36269 586 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 CCR10P46092 362 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 PGDP52209 483 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 HERVK_113P63132 956 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 KCNJ11Q14654 390 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 HKDC1Q2TB90 917 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 ENPP7Q6UWV6 458 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 CROCCP3Q8IVE0 287 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 PIWIL1Q96J94 861 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 ERVK-6Q9BXR3 956 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 CARS2Q9HA77 564 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 GDAP2Q9NXN4 497 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 IL36AQ9UHA7 158 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 RUVBL1Q9Y265 456 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 OAS3Q9Y6K5 1087 aaKnown RBP12.59□□□□□ -0.39
CHD4-211ENST00000544484 CACNA1FO60840 1977 aa12.59□□□□□ -0.39
CHD4-211ENST00000544484 MTHFD1P11586 935 aaKnown RBP12.58□□□□□ -0.4
CHD4-211ENST00000544484 CD247P20963 164 aa12.58□□□□□ -0.4
CHD4-211ENST00000544484 PTPRCAPQ14761 206 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms