RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CYS1Q717R9 158 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 TMEM159Q96B96 161 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 PRR11Q96HE9 360 aaPredicted RBP18.64■□□□□ 0.57
DDX55-211ENST00000544429 MVB12BQ9H7P6 319 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 SYNDIG1Q9H7V2 258 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 KLHL42Q9P2K6 505 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 GALPQ9UBC7 116 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 EPHA6Q9UF33 1036 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 COMMD10Q9Y6G5 202 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 COLEC10Q9Y6Z7 277 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 IGF2RP11717 2491 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 C1QTNF9BB2RNN3 333 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 IFRD1O00458 451 aaPredicted RBP18.63■□□□□ 0.57
DDX55-211ENST00000544429 DXOO77932 396 aaKnown RBP18.63■□□□□ 0.57
DDX55-211ENST00000544429 AHSGP02765 367 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 APOA4P06727 396 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 PROS1P07225 676 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 C1QTNF9P0C862 333 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 ATP5DP30049 168 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 CAPZBP47756 277 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 CLCN7P51798 805 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 HSPA14Q0VDF9 509 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 TRA2AQ13595 282 aaKnown RBP eCLIP18.63■□□□□ 0.57
DDX55-211ENST00000544429 BRD3Q15059 726 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 SYTL3Q4VX76 610 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 PLEKHS1Q5SXH7 462 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 UNQ6494/PRO21346Q6UXR6 183 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 PYROXD1Q8WU10 500 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 RSC1A1Q92681 617 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 KCNJ9Q92806 393 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 MCMBPQ9BTE3 642 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 SAYSD1Q9NPB0 183 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 PCDHGA8Q9Y5G5 932 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 DMXL2Q8TDJ6 3036 aa18.63■□□□□ 0.57
DDX55-211ENST00000544429 ECHS1P30084 290 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 LSSP48449 732 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 CARSP49589 748 aaKnown RBP18.62■□□□□ 0.57
DDX55-211ENST00000544429 TIAL1Q01085 375 aaKnown RBP eCLIP18.62■□□□□ 0.57
DDX55-211ENST00000544429 EIF3IQ13347 325 aaKnown RBP18.62■□□□□ 0.57
DDX55-211ENST00000544429 OTOAQ7RTW8 1153 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 ARHGAP22Q7Z5H3 698 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 TBC1D21Q8IYX1 336 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 ACVR1CQ8NER5 493 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 GIMAP7Q8NHV1 300 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 GABPB2Q8TAK5 448 aaPredicted RBP18.62■□□□□ 0.57
DDX55-211ENST00000544429 NXPE2Q96DL1 559 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 AHCYL2Q96HN2 611 aaKnown RBP18.62■□□□□ 0.57
DDX55-211ENST00000544429 AARSD1Q9BTE6 412 aaKnown RBP18.62■□□□□ 0.57
DDX55-211ENST00000544429 TFB2MQ9H5Q4 396 aaKnown RBP18.62■□□□□ 0.57
DDX55-211ENST00000544429 FAM114A2Q9NRY5 505 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 SEMA5BQ9P283 1151 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 SLC17A6Q9P2U8 582 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 ADAMTS20P59510 1910 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 CELSR3Q9NYQ7 3312 aa18.62■□□□□ 0.57
DDX55-211ENST00000544429 APC2O95996 2303 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 CCDC187A0A096LP49 1063 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 HGSO14964 777 aaPredicted RBP18.61■□□□□ 0.57
DDX55-211ENST00000544429 GSTA2P09210 222 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 TPBGLP0DKB5 382 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 TYRP1P17643 537 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 CD9P21926 228 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 SSTR1P30872 391 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 GPX6P59796 221 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 MGAT5Q09328 741 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 C16orf72Q14CZ0 275 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 TMED2Q15363 201 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 UNC5DQ6UXZ4 953 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 PLXDC1Q8IUK5 500 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 RELL1Q8IUW5 271 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 PHC3Q8NDX5 983 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 OR5AR1Q8NGP9 310 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 OR5K2Q8NHB8 316 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 WDR36Q8NI36 951 aaKnown RBP18.61■□□□□ 0.57
DDX55-211ENST00000544429 NCSTNQ92542 709 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 CCDC74BQ96LY2 380 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 FERD3LQ96RJ6 166 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 SLC30A3Q99726 388 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 STRADBQ9C0K7 418 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 POLR1BQ9H9Y6 1135 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 SATB2Q9UPW6 733 aa18.61■□□□□ 0.57
DDX55-211ENST00000544429 MAP1BP46821 2468 aaKnown RBP18.6■□□□□ 0.57
DDX55-211ENST00000544429 PMS2P1A4D2B8 440 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 MATN4O95460 622 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 ANKRD34CP0C6C1 535 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 MAGEA4P43358 317 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 CSE1LP55060 971 aaKnown RBP18.6■□□□□ 0.57
DDX55-211ENST00000544429 GFERP55789 205 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 SLC26A11Q86WA9 606 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 RASGRP3Q8IV61 690 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 ZBTB2Q8N680 514 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 KDF1Q8NAX2 398 aaPredicted RBP18.6■□□□□ 0.57
DDX55-211ENST00000544429 LRRN4CLQ8ND94 238 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 OR52E1Q8NGJ3 308 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 JPH3Q8WXH2 748 aaPredicted RBP18.6■□□□□ 0.57
DDX55-211ENST00000544429 C9orf72Q96LT7 481 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 MENTQ9BUN1 341 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 LRRC4CQ9HCJ2 640 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 SMYD2Q9NRG4 433 aa18.6■□□□□ 0.57
DDX55-211ENST00000544429 CORO1CQ9ULV4 474 aaPredicted RBP18.6■□□□□ 0.57
DDX55-211ENST00000544429 ASF1AQ9Y294 204 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms