RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 DEPDC1BQ8WUY9 529 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 C3orf30Q96M34 536 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 GPATCH1Q9BRR8 931 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 MMTAG2Q9BU76 263 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 ANKZF1Q9H8Y5 726 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 EQTNQ9NQ60 294 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 DNAJB9Q9UBS3 223 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 AGO1Q9UL18 857 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 TMEM184BQ9Y519 407 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 LIPGQ9Y5X9 500 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 PARP4Q9UKK3 1724 aaKnown RBP3.62□□□□□ -1.83
SCFD1-207ENST00000544052 LRRC37A3O60309 1634 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 USP54Q70EL1 1684 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 CAMTA1Q9Y6Y1 1673 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 TRAV34A0A0B4J273 112 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 A0A1W2PP11 408 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 FAM170AA1A519 330 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 SOCS2O14508 198 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 IPO8O15397 1037 aaKnown RBP3.62□□□□□ -1.83
SCFD1-207ENST00000544052 XRCC3O43542 346 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 WISP2O76076 250 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 KCNA5P22460 613 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 AZGP1P25311 298 aaKnown RBP3.62□□□□□ -1.83
SCFD1-207ENST00000544052 FASLGP48023 281 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 SNRPEP62304 92 aaKnown RBP3.62□□□□□ -1.83
SCFD1-207ENST00000544052 MPP7Q5T2T1 576 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 PPP1R21Q6ZMI0 780 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 FJX1Q86VR8 437 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 PM20D2Q8IYS1 436 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 OR2AJ1Q8NGZ0 328 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 OR14A16Q8NHC5 309 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 NEK1Q96PY6 1258 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 OR6C1Q96RD1 312 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 OSER1Q9NX31 292 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF541Q9H0D2 1346 aa3.62□□□□□ -1.83
SCFD1-207ENST00000544052 FEZF1A0PJY2 475 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ARHGEF37A1IGU5 675 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 H0Y626 953 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 H3BNX3 289 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SSX4O60224 188 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SERPINI2O75830 405 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 TMEM191BP0C7N4 346 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 PCYT1AP49585 367 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 PDE1BQ01064 536 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 CRYZQ08257 329 aaKnown RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 TROAPQ12815 778 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 BFSP1Q12934 665 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF273Q14593 569 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 VWC2Q2TAL6 325 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 XKR9Q5GH70 373 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 RNASEH2BQ5TBB1 312 aaKnown RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SYCE2Q6PIF2 218 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ERN2Q76MJ5 926 aaKnown RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 MEPCEQ7L2J0 689 aaKnown RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 UNC5CLQ8IV45 518 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 GCSAMQ8N6F7 178 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SMRP1Q8NCR6 262 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SLC38A5Q8WUX1 472 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 VMP1Q96GC9 406 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 FAM81BQ96LP2 452 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF582Q96NG8 517 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 MS4A10Q96PG2 267 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 RAB3IPQ96QF0 476 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 FNBP1Q96RU3 617 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SLC22A12Q96S37 553 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SLC25A23Q9BV35 468 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 THUMPD3Q9BV44 507 aaKnown RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 DCLK3Q9C098 648 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 PFDN4Q9NQP4 134 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 RCC2Q9P258 522 aaKnown RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SLC24A2Q9UI40 661 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 KCNS2Q9ULS6 477 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 POMT1Q9Y6A1 747 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ASTN2O75129 1339 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 LTN1O94822 1766 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 OR2M5A3KFT3 312 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ANKUB1A6NFN9 424 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 DNAJC9-AS1A6NH13 148 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 TRIM77I1YAP6 450 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 KDM4BO94953 1096 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 CLDN14O95500 239 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SRCP12931 536 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 OAS2P29728 719 aaKnown RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 HOXD3P31249 432 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 RBPJQ06330 500 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ACSM1Q08AH1 577 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 PET117Q6UWS5 81 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ZBTB49Q6ZSB9 765 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 DEFB132Q7Z7B7 95 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SNX32Q86XE0 403 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SPATA22Q8NHS9 363 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SETD6Q8TBK2 473 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SCMH1Q96GD3 660 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 CAMK1GQ96NX5 476 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 CITED2Q99967 270 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 FNDC11Q9BVV2 318 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 SLA2Q9H6Q3 261 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 XAB2Q9HCS7 855 aaKnown RBP3.61□□□□□ -1.83
SCFD1-207ENST00000544052 ABCF3Q9NUQ8 709 aa3.61□□□□□ -1.83
SCFD1-207ENST00000544052 OCIAD1Q9NX40 245 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms